RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 OR2H2O95918 312 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 EPHA1P21709 976 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 LMO1P25800 156 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 CALRP27797 417 aaKnown RBP9.3□□□□□ -0.92
SF3B6-201ENST00000233468 ERP29P30040 261 aaKnown RBP9.3□□□□□ -0.92
SF3B6-201ENST00000233468 KCNJ3P48549 501 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 CEBPDP49716 269 aaPredicted RBP9.3□□□□□ -0.92
SF3B6-201ENST00000233468 SNU13P55769 128 aaKnown RBP9.3□□□□□ -0.92
SF3B6-201ENST00000233468 EDDM3BP56851 147 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 SCN1BQ07699 218 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 MPV17LQ2QL34 196 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 SLC22A6Q4U2R8 563 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 NCR3LG1Q68D85 454 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 CRIP3Q6Q6R5 217 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 GLIPR1L1Q6UWM5 242 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 TSPAN14Q8NG11 270 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 MUL1Q969V5 352 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 NR1H4Q96RI1 486 aaPredicted RBP9.3□□□□□ -0.92
SF3B6-201ENST00000233468 JMJD8Q96S16 334 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 SUCNR1Q9BXA5 334 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 BARHL1Q9BZE3 327 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 MS4A7Q9GZW8 240 aaPredicted RBP9.3□□□□□ -0.92
SF3B6-201ENST00000233468 ST3GAL6Q9Y274 331 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 SF3B6Q9Y3B4 125 aaKnown RBP9.3□□□□□ -0.92
SF3B6-201ENST00000233468 TRAV1-2A0A0B4J238 106 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 OR7C1O76099 320 aaPredicted RBP9.29□□□□□ -0.92
SF3B6-201ENST00000233468 TFF1P04155 84 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 CSN2P05814 226 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 CALCBP10092 127 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 CD33P20138 364 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 SERPINA2P20848 420 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 HTR2CP28335 458 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 DUSP1P28562 367 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 FABP5Q01469 135 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 INSL4Q14641 139 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 SSX1Q16384 188 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 TIMM50Q3ZCQ8 353 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 SYT6Q5T7P8 510 aaPredicted RBP9.29□□□□□ -0.92
SF3B6-201ENST00000233468 CD200R1LQ6Q8B3 271 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 TMEM91Q6ZNR0 172 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 C1orf229Q6ZS94 237 aaPredicted RBP9.29□□□□□ -0.92
SF3B6-201ENST00000233468 RNF144BQ7Z419 303 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 OR6M1Q8NGM8 313 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 SIRPDQ9H106 197 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 IFT22Q9H7X7 185 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 STUB1Q9UNE7 303 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 SSR3Q9UNL2 185 aa9.29□□□□□ -0.92
SF3B6-201ENST00000233468 TRGV10A0A0A0MS01 117 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 TRAV40A0A0B4J280 105 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 A0A0G2JK05 382 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 TMEM82A0PJX8 343 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 MAGEA13PA6NCF6 341 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A10PA6NDY2 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A18PA6NE21 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A16PA6NEW6 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A20PA6NIJ5 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A8PA6NJQ4 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A7PA6NKC0 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A22PA8MWA6 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A12PA8MX19 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A5PA8MXJ8 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A23PA8MXZ1 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 TCF21O43680 179 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FCN3O75636 299 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 CRTAPO75718 401 aaPredicted RBP9.28□□□□□ -0.92
SF3B6-201ENST00000233468 BPNT1O95861 308 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FSHBP01225 129 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 RBP4P02753 201 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A15PP0C7V4 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A13PP0C7W8 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A14PP0C7W9 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM90A24PP0C7X0 464 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 MMP9P14780 707 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 PRTN3P24158 256 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 P2RX3P56373 397 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 RBM11P57052 281 aaKnown RBP9.28□□□□□ -0.92
SF3B6-201ENST00000233468 RBM39Q14498 530 aaKnown RBP9.28□□□□□ -0.92
SF3B6-201ENST00000233468 EDDM3AQ14507 147 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 NEDD8Q15843 81 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM189A2Q15884 450 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 PAN3Q58A45 887 aaKnown RBP9.28□□□□□ -0.92
SF3B6-201ENST00000233468 C1orf100Q5SVJ3 147 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 FAM27D1Q5T7N8 215 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 TMEM200BQ69YZ2 307 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 C17orf107Q6ZR85 190 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 C9orf139Q6ZV77 190 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 USP43Q70EL4 1123 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 VMO1Q7Z5L0 202 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 LRRTM1Q86UE6 522 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 OR4M1Q8NGD0 313 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 OR10K1Q8NGX5 313 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 KCNG3Q8TAE7 436 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 ZNF714Q96N38 554 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 CHST6Q9GZX3 395 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 ZNF696Q9H7X3 374 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 HEXA-AS1Q9H8Q6 139 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 UNKLQ9H9P5 680 aaKnown RBP9.28□□□□□ -0.92
SF3B6-201ENST00000233468 PLGRKTQ9HBL7 147 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 IL36RNQ9UBH0 155 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 UBE2J1Q9Y385 318 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms