RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 MKRN2OSH3BPM6 223 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 RCC1P18754 421 aaPredicted RBP11.78□□□□□ -0.52
NEK4-201ENST00000233027 HDHD3Q9BSH5 251 aaPredicted RBP11.78□□□□□ -0.52
NEK4-201ENST00000233027 Q9N2K0 584 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 ACTL6AO96019 429 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 CSN3P07498 182 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 HOXC4P09017 264 aaPredicted RBP11.78□□□□□ -0.52
NEK4-201ENST00000233027 BSXQ3C1V8 233 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 TMEM97Q5BJF2 176 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 IGSF11Q5DX21 431 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 UBALD2Q8IYN6 164 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 OR1K1Q8NGR3 316 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 TRAV39A0A0B4J263 110 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 A0A1B0GTQ1 180 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 RPL13AP40429 203 aaKnown RBP11.78□□□□□ -0.52
NEK4-201ENST00000233027 RAB7AP51149 207 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 SH2D2AQ9NP31 389 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 ST6GALNAC2Q9UJ37 374 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 DTX4Q9Y2E6 619 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 ABCA3Q99758 1704 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 C11orf94C9JXX5 98 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 M0R2Z0 102 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 KIR2DS2P43631 304 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 SKP2Q13309 424 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 R3HDM4Q96D70 268 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 HSF4Q9ULV5 492 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 SMCHD1A6NHR9 2005 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 NKX2-6A6NCS4 301 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 OR4C45A6NMZ5 311 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 SYNGR2O43760 224 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 TTRP02766 147 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 HLA-GP17693 338 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 SULT1A1P50225 295 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 EWSR1Q01844 656 aaKnown RBP eCLIP11.78□□□□□ -0.52
NEK4-201ENST00000233027 OR1L6Q8NGR2 347 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 CXXC4Q9H2H0 198 aa11.78□□□□□ -0.52
NEK4-201ENST00000233027 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.78□□□□□ -0.52
NEK4-201ENST00000233027 AGFG2O95081 481 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 PEBP1P30086 187 aaKnown RBP11.77□□□□□ -0.52
NEK4-201ENST00000233027 SRD5A2P31213 254 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 CCKARP32238 428 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 ZNF383Q8NA42 475 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 SSMEM1Q8WWF3 244 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 PACRGQ96M98 296 aaPredicted RBP11.77□□□□□ -0.52
NEK4-201ENST00000233027 R4GN57 208 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 A0A1W2PRD5 423 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 A0A1W2PRF3 423 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 A0A1W2PRM7 423 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 CYR61O00622 381 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 G6PCP35575 357 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 SSPNQ14714 243 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 TUSC5Q8IXB3 177 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 TCTEX1D1Q8N7M0 179 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 TMEM52Q8NDY8 209 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 SLC26A1Q9H2B4 701 aa11.77□□□□□ -0.52
NEK4-201ENST00000233027 PCDHGA9Q9Y5G4 932 aaKnown RBP11.77□□□□□ -0.52
NEK4-201ENST00000233027 DOCK5Q9H7D0 1870 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 C7orf77A4D0Y5 90 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 LINC00862A6NCI5 91 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 MANBALQ9NQG1 85 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 KLK10O43240 276 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 BGLAPP02818 100 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 ANKRD34CP0C6C1 535 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 PMELP40967 661 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 SMUG1Q53HV7 270 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 Q6ZN92 141 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 OR2T10Q8NGZ9 312 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 ADAT3Q96EY9 351 aaPredicted RBP11.77□□□□□ -0.53
NEK4-201ENST00000233027 IER2Q9BTL4 223 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 PRSS50Q9UI38 385 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 KIF13BQ9NQT8 1826 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 A0A087X0M5 115 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 A0A1B0GX30 115 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 MBPP02686 304 aaPredicted RBP11.77□□□□□ -0.53
NEK4-201ENST00000233027 PTPMT1Q8WUK0 201 aaPredicted RBP11.77□□□□□ -0.53
NEK4-201ENST00000233027 RASL10BQ96S79 203 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 SRD5A3Q9H8P0 318 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 AURKAIP1Q9NWT8 199 aaPredicted RBP11.77□□□□□ -0.53
NEK4-201ENST00000233027 FUT9Q9Y231 359 aa11.77□□□□□ -0.53
NEK4-201ENST00000233027 CRYBA1P05813 215 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 NXPH1P58417 271 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 UBE2L3P68036 154 aaKnown RBP11.76□□□□□ -0.53
NEK4-201ENST00000233027 CEBPEQ15744 281 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 TNXAQ16473 311 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 SLC25A30Q5SVS4 291 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 OR2M5A3KFT3 312 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 K7ESF4 209 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 PPYP01298 95 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 VSIG8P0DPA2 414 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 NANOS3P60323 173 aaKnown RBP11.76□□□□□ -0.53
NEK4-201ENST00000233027 FOXC1Q12948 553 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 ATP6V1FQ16864 119 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 TRAT1Q6PIZ9 186 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 OR4P4Q8NGL7 312 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 UCN2Q96RP3 112 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 PAPPA2Q9BXP8 1791 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 FAM90A27PA6NNH2 459 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 PPIHO43447 177 aaKnown RBP11.76□□□□□ -0.53
NEK4-201ENST00000233027 RPS4Y1P22090 263 aaKnown RBP11.76□□□□□ -0.53
NEK4-201ENST00000233027 KLF3P57682 345 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms