RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 OR4F4Q96R69 305 aa12□□□□□ -0.49
SIX4-201ENST00000216513 SLC25A32Q9H2D1 315 aa12□□□□□ -0.49
SIX4-201ENST00000216513 SEBOXQ9HB31 216 aaPredicted RBP12□□□□□ -0.49
SIX4-201ENST00000216513 TMEFF2Q9UIK5 374 aaPredicted RBP12□□□□□ -0.49
SIX4-201ENST00000216513 SRCAPQ6ZRS2 3230 aa12□□□□□ -0.49
SIX4-201ENST00000216513 ARPC4-TTLL3A0A0A6YYG9 625 aa12□□□□□ -0.49
SIX4-201ENST00000216513 GPR31O00270 319 aa12□□□□□ -0.49
SIX4-201ENST00000216513 BPIFB3P59826 476 aa12□□□□□ -0.49
SIX4-201ENST00000216513 ZNF835Q9Y2P0 537 aa12□□□□□ -0.49
SIX4-201ENST00000216513 ARRDC5A6NEK1 342 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 IFITM5A6NNB3 132 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 TSTD3H0UI37 97 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 FOXH1O75593 365 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 GABRB1P18505 474 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 NBL1P41271 181 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 PSG4Q00888 419 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 MFSD4AQ8N468 514 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 SLC35D1Q9NTN3 355 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 MED9Q9NWA0 146 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 WIPI2Q9Y4P8 454 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 AESQ08117 197 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 DOLPP1Q86YN1 238 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 CDH26Q8IXH8 852 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 YIPF5Q969M3 257 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 ZNF488Q96MN9 340 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 UBE2L5PA0A1B0GUS4 154 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 SERPINE3A8MV23 424 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 RCL1Q9Y2P8 373 aaKnown RBP11.99□□□□□ -0.49
SIX4-201ENST00000216513 A0A1W2PNV4 684 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 NTN3O00634 580 aaPredicted RBP11.99□□□□□ -0.49
SIX4-201ENST00000216513 ERGP11308 486 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 DAOP14920 347 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 KCNJ3P48549 501 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 UBE2G1P62253 170 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 OR52L2PQ8NGH6 319 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 DYNC2LI1Q8TCX1 351 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 RXFP4Q8TDU9 374 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 YIPF6Q96EC8 236 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 DOK5Q9P104 306 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 OR4E1P0C645 316 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 SLC25A6P12236 298 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 PSMB3P49720 205 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 MOB1BQ7L9L4 216 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 CALHM3Q86XJ0 350 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 OR10P1Q8NGE3 313 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 WDR89Q96FK6 387 aaPredicted RBP11.99□□□□□ -0.49
SIX4-201ENST00000216513 ARHGAP5-AS1Q96IT6 56 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 MIOXQ9UGB7 285 aa11.99□□□□□ -0.49
SIX4-201ENST00000216513 RIF1Q5UIP0 2472 aaKnown RBP11.99□□□□□ -0.49
SIX4-201ENST00000216513 TMEM210A6NLX4 147 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 C4orf51C9J302 202 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 OR7C2O60412 319 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 CRHP06850 196 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 CT45A10P0DMU9 189 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 ACKR3P25106 362 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 GAMTQ14353 236 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 TMEM41BQ5BJD5 291 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 ITPKCQ96DU7 683 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 STRAPQ9Y3F4 350 aaKnown RBP11.98□□□□□ -0.49
SIX4-201ENST00000216513 OR5M8Q8NGP6 311 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 RNF141Q8WVD5 230 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 RBPMSQ93062 196 aaKnown RBP11.98□□□□□ -0.49
SIX4-201ENST00000216513 ZNF714Q96N38 554 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 GABARAPL1Q9H0R8 117 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 FOXJ3Q9UPW0 622 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 IGHV3-72A0A0B4J1Y9 119 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 PRDX2P32119 198 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 MVDP53602 400 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 XAF1Q6GPH4 301 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 ZNF826PQ6ZT77 177 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 TPRX1Q8N7U7 411 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 RABAC1Q9UI14 185 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 SEC16AO15027 2179 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 FAM106CPP0CH98 169 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 RAB5CP51148 216 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 SUCLG1P53597 346 aaKnown RBP11.98□□□□□ -0.49
SIX4-201ENST00000216513 THSD7BQ9C0I4 1608 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 NTF3P20783 257 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 OR52N4Q8NGI2 321 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 TXN2Q99757 166 aa11.98□□□□□ -0.49
SIX4-201ENST00000216513 SCN2AQ99250 2005 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 A0A1W2PRX2 142 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 OR5H14A6NHG9 310 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 HBE1P02100 147 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 LSMEM1Q8N8F7 131 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 MIA3Q5JRA6 1907 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 PPIAL4CA0A0B4J2A2 164 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 OR2J3O76001 311 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 PPIAL4GP0DN37 164 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 DBX2Q6ZNG2 339 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 C15orf54Q8N8G6 183 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 NIPSNAP3BQ9BS92 247 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 C7orf69Q9H7B7 122 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 IGHV3-21A0A0B4J1V1 117 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 TMEM272A0A1B0GTI8 110 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 TMEM229AB2RXF0 380 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 ZBTB37Q5TC79 503 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 RPL7L1Q6DKI1 246 aaKnown RBP11.97□□□□□ -0.49
SIX4-201ENST00000216513 POM121Q96HA1 1249 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 J3QT63 122 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms