RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 PNLIPRP3Q17RR3 467 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 C4orf17Q53FE4 359 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 FAHD2BQ6P2I3 314 aaPredicted RBP13.04□□□□□ -0.32
EFNB1-201ENST00000204961 OR1K1Q8NGR3 316 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 OR2G3Q8NGZ4 309 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 FAHD2AQ96GK7 314 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 SEC11CQ9BY50 192 aa13.04□□□□□ -0.32
EFNB1-201ENST00000204961 MYOZ1Q9NP98 299 aaPredicted RBP13.04□□□□□ -0.32
EFNB1-201ENST00000204961 IGLV3-12A0A075B6K2 115 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 C7orf77A4D0Y5 90 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 ADAM20O43506 726 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 IFNA4P05014 189 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 PRF1P14222 555 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 ARF1P84077 181 aaKnown RBP13.03□□□□□ -0.32
EFNB1-201ENST00000204961 LTC4SQ16873 150 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 ACTBL2Q562R1 376 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 EIF5AL1Q6IS14 154 aaKnown RBP13.03□□□□□ -0.32
EFNB1-201ENST00000204961 ZNF343Q6P1L6 599 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 KMT5CQ86Y97 462 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 TUSC5Q8IXB3 177 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 THOC3Q96J01 351 aaKnown RBP13.03□□□□□ -0.32
EFNB1-201ENST00000204961 SMCO4Q9NRQ5 59 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 RNF150Q9ULK6 438 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 SYNGR1O43759 233 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 MRPL33O75394 65 aaKnown RBP13.03□□□□□ -0.32
EFNB1-201ENST00000204961 H2AFB1P0C5Y9 115 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 TBPP20226 339 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 RPS10P46783 165 aaKnown RBP13.03□□□□□ -0.32
EFNB1-201ENST00000204961 FGF8P55075 233 aaPredicted RBP13.03□□□□□ -0.32
EFNB1-201ENST00000204961 DSCR4P56555 118 aaPredicted RBP13.03□□□□□ -0.32
EFNB1-201ENST00000204961 VAMP2P63027 116 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 TMEM267Q0VDI3 215 aaPredicted RBP13.03□□□□□ -0.32
EFNB1-201ENST00000204961 ZNF385CQ66K41 422 aaPredicted RBP13.03□□□□□ -0.32
EFNB1-201ENST00000204961 PP6455Q8WZ26 134 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 NAA60Q9H7X0 242 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 NOSIPQ9Y314 301 aaKnown RBP13.03□□□□□ -0.32
EFNB1-201ENST00000204961 AKAP6Q13023 2319 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 HSPA12AO43301 675 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 CST4P01036 141 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 CD37P11049 281 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 ZNF154Q13106 437 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 GNMTQ14749 295 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 ATP1A1-AS1Q5TC04 95 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 MRPL14Q6P1L8 145 aaKnown RBP13.03□□□□□ -0.32
EFNB1-201ENST00000204961 GAPTQ8N292 157 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 RHBDD1Q8TEB9 315 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 EXTL1Q92935 676 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 HIST1H2BAQ96A08 127 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 ZNF286AQ9HBT8 521 aa13.03□□□□□ -0.32
EFNB1-201ENST00000204961 DEDDO75618 318 aa13.02□□□□□ -0.32
EFNB1-201ENST00000204961 HLA-GP17693 338 aa13.02□□□□□ -0.32
EFNB1-201ENST00000204961 S100A12P80511 92 aa13.02□□□□□ -0.32
EFNB1-201ENST00000204961 SPINK9Q5DT21 86 aa13.02□□□□□ -0.32
EFNB1-201ENST00000204961 AQP10Q96PS8 301 aa13.02□□□□□ -0.32
EFNB1-201ENST00000204961 KCNJ16Q9NPI9 418 aa13.02□□□□□ -0.32
EFNB1-201ENST00000204961 KCNS2Q9ULS6 477 aa13.02□□□□□ -0.32
EFNB1-201ENST00000204961 PPP1R3CQ9UQK1 317 aa13.02□□□□□ -0.32
EFNB1-201ENST00000204961 ADGRG4Q8IZF6 3080 aa13.02□□□□□ -0.33
EFNB1-201ENST00000204961 IGKV1D-13A0A0B4J2D9 117 aa13.02□□□□□ -0.33
EFNB1-201ENST00000204961 YIF1AO95070 293 aa13.02□□□□□ -0.33
EFNB1-201ENST00000204961 IGKV1-13P0DP09 117 aa13.02□□□□□ -0.33
EFNB1-201ENST00000204961 CFPP27918 469 aa13.02□□□□□ -0.33
EFNB1-201ENST00000204961 Q0VFX4 171 aa13.02□□□□□ -0.33
EFNB1-201ENST00000204961 Q6ZPA2 131 aa13.02□□□□□ -0.33
EFNB1-201ENST00000204961 PFDN5Q99471 154 aa13.02□□□□□ -0.33
EFNB1-201ENST00000204961 ZNF251Q9BRH9 671 aa13.02□□□□□ -0.33
EFNB1-201ENST00000204961 DUSP23Q9BVJ7 150 aa13.02□□□□□ -0.33
EFNB1-201ENST00000204961 OR14J1Q9UGF5 321 aa13.02□□□□□ -0.33
EFNB1-201ENST00000204961 CARHSP1Q9Y2V2 147 aaKnown RBP13.02□□□□□ -0.33
EFNB1-201ENST00000204961 NCKAP5O14513 1909 aa13.02□□□□□ -0.33
EFNB1-201ENST00000204961 ZNF732B4DXR9 585 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 ST8SIA3O43173 380 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 EIF1BO60739 113 aaKnown RBP13.01□□□□□ -0.33
EFNB1-201ENST00000204961 FAM3AP98173 230 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 C21orf62-AS1Q17RA5 79 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 FAM89BQ8N5H3 189 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 OR5C1Q8NGR4 320 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 LRFN1Q9P244 771 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 CRYM-AS1A6NIL9 109 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 CBR3O75828 277 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 LCN15Q6UWW0 184 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 TBC1D26Q86UD7 250 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 WNT5BQ9H1J7 359 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 DEFB127Q9H1M4 99 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 FAM212BQ9NTI7 297 aaPredicted RBP13.01□□□□□ -0.33
EFNB1-201ENST00000204961 TMEM38BQ9NVV0 291 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 ZDHHC8Q9ULC8 765 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 LIPGQ9Y5X9 500 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 BORCS7-ASMTA0A0B4J1R7 106 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 C10orf142B7Z368 130 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 LSM6P62312 80 aaKnown RBP13.01□□□□□ -0.33
EFNB1-201ENST00000204961 RAC1P63000 192 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 H3F3AP84243 136 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 PLGLB1Q02325 96 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 OR2T2Q6IF00 324 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 MRPL21Q7Z2W9 205 aaKnown RBP13.01□□□□□ -0.33
EFNB1-201ENST00000204961 FADS6Q8N9I5 356 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 CHRNA10Q9GZZ6 450 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 FZR1Q9UM11 496 aa13.01□□□□□ -0.33
EFNB1-201ENST00000204961 CHD3Q12873 2000 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms