RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 TFPI2P48307 235 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 ARF1P84077 181 aaKnown RBP8.79□□□□□ -1
CLDN18-201ENST00000183605 MALLQ13021 153 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 ENDOGQ14249 297 aaKnown RBP8.79□□□□□ -1
CLDN18-201ENST00000183605 BAGE3Q86Y29 109 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 BAGE2Q86Y30 109 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 RHBDD1Q8TEB9 315 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 DDIT4LQ96D03 193 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 SCARF2Q96GP6 870 aaPredicted RBP8.79□□□□□ -1
CLDN18-201ENST00000183605 ARV1Q9H2C2 271 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 P4HTMQ9NXG6 502 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 NAT8Q9UHE5 227 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 ARHGEF17Q96PE2 2063 aaPredicted RBP8.79□□□□□ -1
CLDN18-201ENST00000183605 LOC102723971A0A1B0GUV8 181 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 A0A1B0GW64 132 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 MAP1LC3B2A6NCE7 125 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 RBMXL2O75526 392 aaKnown RBP8.79□□□□□ -1
CLDN18-201ENST00000183605 IAPPP10997 89 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 UCP2P55851 309 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 FUT7Q11130 342 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 SHISA6Q6ZSJ9 500 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 MYPOPQ86VE0 399 aaPredicted RBP8.79□□□□□ -1
CLDN18-201ENST00000183605 MRPL43Q8N983 215 aaKnown RBP8.79□□□□□ -1
CLDN18-201ENST00000183605 OR10J5Q8NHC4 309 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 EXTL1Q92935 676 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 ACY3Q96HD9 319 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 BMFQ96LC9 184 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 MAP1LC3BQ9GZQ8 125 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 PLEK2Q9NYT0 353 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 SEMA5BQ9P283 1151 aa8.79□□□□□ -1
CLDN18-201ENST00000183605 TRBV24-1A0A075B6N3 115 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 TRAV34A0A0B4J273 112 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 ZNF737O75373 536 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 EFEMP2O95967 443 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 TNFP01375 233 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 CNN1P51911 297 aaKnown RBP8.78□□□□□ -1
CLDN18-201ENST00000183605 RUNX3Q13761 415 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 RTP5Q14D33 572 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 DPPA3Q6W0C5 159 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 PTPMT1Q8WUK0 201 aaPredicted RBP8.78□□□□□ -1
CLDN18-201ENST00000183605 ASB10Q8WXI3 467 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 ZNF524Q96C55 264 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 SERINC1Q9NRX5 453 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 AURKAIP1Q9NWT8 199 aaPredicted RBP8.78□□□□□ -1
CLDN18-201ENST00000183605 UNC13CQ8NB66 2214 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 CD55P08174 381 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 TNFSF10P50591 281 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 FAM3BP58499 235 aaPredicted RBP8.78□□□□□ -1
CLDN18-201ENST00000183605 FAM78BQ5VT40 261 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 CARFQ8N187 725 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 ZNF709Q8N972 641 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 VN1R17PQ8TDU5 208 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 RBM24Q9BX46 236 aaKnown RBP8.78□□□□□ -1
CLDN18-201ENST00000183605 CALHM2Q9HA72 323 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 SDF2L1Q9HCN8 221 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 DNAJC4Q9NNZ3 241 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 RYDENQ9NUL5 291 aaKnown RBP8.78□□□□□ -1
CLDN18-201ENST00000183605 SHANK1Q9Y566 2161 aa8.78□□□□□ -1
CLDN18-201ENST00000183605 HSPB6O14558 160 aa8.77□□□□□ -1
CLDN18-201ENST00000183605 CD33P20138 364 aa8.77□□□□□ -1
CLDN18-201ENST00000183605 TAS2R30P59541 319 aa8.77□□□□□ -1
CLDN18-201ENST00000183605 TMEM183BQ1AE95 376 aa8.77□□□□□ -1
CLDN18-201ENST00000183605 H1FOOQ8IZA3 346 aaPredicted RBP8.77□□□□□ -1
CLDN18-201ENST00000183605 CRIPAKQ8N1N5 446 aa8.77□□□□□ -1
CLDN18-201ENST00000183605 OR51H1Q8NH63 302 aa8.77□□□□□ -1
CLDN18-201ENST00000183605 ATP5SQ99766 215 aa8.77□□□□□ -1
CLDN18-201ENST00000183605 FAM103A1Q9BTL3 118 aaKnown RBP8.77□□□□□ -1
CLDN18-201ENST00000183605 RTN4RQ9BZR6 473 aa8.77□□□□□ -1
CLDN18-201ENST00000183605 RPRMQ9NS64 109 aa8.77□□□□□ -1
CLDN18-201ENST00000183605 NUP210Q8TEM1 1887 aaPredicted RBP8.77□□□□□ -1
CLDN18-201ENST00000183605 RPL36A-HNRNPH2H7BZ11 118 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 MPPED1O15442 326 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 IRF2P14316 349 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 HOXB2P14652 356 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 HNRNPKP61978 463 aaKnown RBP eCLIP8.77□□□□□ -1.01
CLDN18-201ENST00000183605 DLX2Q07687 328 aaPredicted RBP8.77□□□□□ -1.01
CLDN18-201ENST00000183605 COL5A1-AS1Q5SY13 56 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 OR8G2PQ6IF36 304 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 SLC25A26Q70HW3 274 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 WDR5BQ86VZ2 330 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 ELSPBP1Q96BH3 223 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 BTF3L4Q96K17 158 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 VPS25Q9BRG1 176 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 FOXJ2Q9P0K8 574 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 FBLN5Q9UBX5 448 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 ANKUB1A6NFN9 424 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 CD300LBA8K4G0 201 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 LILRB3O75022 631 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 CDS2O95674 445 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 EFNA3P52797 238 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 KRTDAPP60985 99 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 SMAD4Q13485 552 aaKnown RBP8.77□□□□□ -1.01
CLDN18-201ENST00000183605 ZNF774Q6NX45 483 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 HLA-CQ95604 372 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 YPEL4Q96NS1 127 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 RIMS4Q9H426 269 aaPredicted RBP8.77□□□□□ -1.01
CLDN18-201ENST00000183605 ZDHHC11Q9H8X9 412 aa8.77□□□□□ -1.01
CLDN18-201ENST00000183605 LCATP04180 440 aa8.76□□□□□ -1.01
CLDN18-201ENST00000183605 CEACAM1P13688 526 aa8.76□□□□□ -1.01
CLDN18-201ENST00000183605 MFAP5Q13361 173 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms