RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Tmem30cQ9D4D7 342 aa10.24□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Twsg1Q9EP52 222 aa10.24□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Akip1Q9JJR5 212 aa10.24□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Il36aQ9JLA2 160 aa10.24□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Urb1Q571H0 2274 aaKnown RBP10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Gm4881A0A140LIR9 352 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Olfr1158A2BHP7 313 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Zfp648D3Z0W3 525 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Gm21976J3QNN2 249 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 P01882 290 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Cbr2P08074 244 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Olfr13P34984 310 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Kcnj3P63250 501 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 AdmP97297 184 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Isg20l2Q3U1G5 368 aaKnown RBP10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Slc38a11Q3USY0 453 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Lrfn4Q80XU8 636 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 9130023H24RikQ8BG98 337 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Zfp286Q8C0E6 519 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Dmrta1Q8CFG4 490 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Srsf4Q8VE97 489 aaKnown RBP10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Olfr794Q8VF26 320 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Rtl8bQ9D1F0 113 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Znf319Q9ERR8 581 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Arhgap21Q6DFV3 1944 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Spink14B9EJP9 96 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Cnr1P47746 473 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Cyb5aP56395 134 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 SnrpeP62305 92 aaKnown RBP10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Lsm5P62322 91 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 SryQ05738 395 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 HgsnatQ3UDW8 656 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 DdiasQ6NZG4 898 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Flrt1Q6RKD8 674 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Fam76bQ80XP8 339 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Mrpl22Q8BU88 206 aaKnown RBP10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Prss42Q8VIF2 335 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Fyttd1Q91Z49 317 aaKnown RBP10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 HaghQ99KB8 309 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Ndufa9Q9DC69 377 aaKnown RBP10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Olfr943Q9EQ92 314 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Fgf16Q9ESL8 207 aa10.23□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Olfr1039A2ARY0 319 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Ndufb11O09111 151 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Igkv7-33P01632 114 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 NppaP05125 152 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Fgf4P11403 202 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 VtnP29788 478 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Pax4P32115 349 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Rab3cP62823 227 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Rap1aP62835 184 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 MENTQ569E4 350 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Vmn1r223Q5SSA0 361 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Taf9bQ6NZA9 249 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Zfp819Q80V81 607 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Fam124bQ8BLQ0 456 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Tssk5Q8C1R0 372 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 WrbQ8K0D7 174 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Vmn1r19Q8R2C7 308 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Sectm1aQ921W8 192 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Rap1bQ99JI6 184 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Ndufa6Q9CQZ5 131 aaKnown RBP10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Snu13Q9D0T1 128 aaKnown RBP10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Tmem50bQ9D1X9 158 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Spaca7Q9D2S4 182 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 LitafQ9JLJ0 161 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Mmp16Q9WTR0 607 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Wdfy4E9Q2M9 3149 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Fbxw25F7C9P2 466 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 H2-M1F7CXU4 344 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 4933408B17RikG3X9B4 273 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 S1pr1O08530 382 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 MscO88940 201 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Tcn2O88968 430 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Cd40P27512 289 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 AhsgP29699 345 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Fthl17dQ3SXD1 176 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Olfr323Q5NCD0 323 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Zfp30Q60585 533 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 BC061237Q6P8I2 184 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Tm2d3Q8BJ83 261 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 C1ql2Q8CFR0 287 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Tceal3Q8R0A5 200 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Olfr279Q8VFD8 310 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Cd209cQ91ZW9 178 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Fthl17Q99MX2 176 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Mtfp1Q9CRB8 166 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Tceal6Q9DB24 200 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Angptl4Q9Z1P8 410 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Olfr1291-ps1A0A286YE47 326 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Olfr31E9Q3K2 317 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Prr22F6TNE3 422 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Vmn2r66K7N6R9 851 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 PrkacaP05132 351 aaKnown RBP10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Mcpt2P15119 244 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Htr2aP35363 471 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Pax9P47242 342 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Lbx1P52955 282 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Rasd2P63032 266 aa10.22□□□□□ -0.77
Col9a1-202ENSMUST00000088349 Supt4h1aP63271 117 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 71.9 ms