RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Gm12258Q5NC63 627 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Csnk2a1Q60737 391 aaKnown RBP11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Sox19Q62249 55 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 OmgQ63912 440 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Zfp82Q6P9Y7 530 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr1212Q7TR08 311 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr1211Q7TR09 311 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Sla2Q8R4L0 259 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr992Q8VGC6 309 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr1377Q8VGH1 307 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 MmachcQ9CZD0 279 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Mrpl13Q9D1P0 178 aaKnown RBP11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Mapk7Q9WVS8 806 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 SncgQ9Z0F7 123 aaKnown RBP11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Gm8797A0A0A6YW67 77 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr721-ps1A0A140T8T9 324 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Tmem185aA2AF53 350 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Gm8020F6WLE9 229 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 H2-EaP01904 255 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 P04224 255 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 C2cd4dP0CG09 341 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Cd1d1P11609 336 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Cd1d2P11610 336 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Irf1P15314 329 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Dusp1P28563 367 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Uba52P62984 128 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 PkiaP63248 76 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Tsr3Q5HZH2 323 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr453Q7TRV7 317 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Glrx5Q80Y14 152 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Actbl2Q8BFZ3 376 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Znf436Q8BPP0 452 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Med28Q920D3 178 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 D730048I06RikQ9CQB8 106 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Carhsp1Q9CR86 148 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Rcc1lQ9CYF5 461 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 S100a16Q9D708 124 aa11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Trip12G5E870 2025 aaKnown RBP11.14□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Arid1aA2BH40 2283 aaKnown RBP11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Ankrd29D3YVV3 309 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 P04945 108 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Zfp36P22893 319 aaKnown RBP11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Polr1dP97304 133 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Btg2Q04211 158 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Lgals3bpQ07797 577 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Q3TTL0 348 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Fam196aQ3USH1 422 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Tmem171Q4KL18 322 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 CelQ64285 599 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Znf250Q7TNU6 535 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr1477Q7TQQ7 315 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr506Q7TRU6 314 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Pdcd10Q8VE70 212 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr56Q8VGD6 315 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Elovl6Q920L5 267 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Ufsp2Q99K23 461 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Phf7Q9DAG9 307 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Sema7aQ9QUR8 664 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Mecp2Q9Z2D6 484 aaKnown RBP11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 CntrlA2AL36 2334 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr623E9Q382 317 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Gm21761J3QK00 171 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 DffbO54788 344 aaKnown RBP11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Cxcl2P10889 100 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Egr3P43300 387 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Galr1P56479 348 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Guk1Q64520 198 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Glt8d1Q6NSU3 371 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Dusp23Q6NT99 150 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Zdhhc25Q810M4 279 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Gfm1Q8K0D5 751 aaKnown RBP11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Prb1Q91X93 504 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Suv39h2Q9EQQ0 477 aa11.13□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Ighv5-15A0A0A6YWC7 117 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 FggyA2AJL3 552 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr1029A2ATE0 324 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Ly6g6fB2RXM6 300 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 AF067061O70616 171 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Atp4bP50992 294 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 PilraQ2YFS3 302 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 1700057G04RikQ3V0U0 232 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr1028Q7TR89 324 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 ClmQ7TSN2 230 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Cdadc1Q8BMD5 523 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Exosc6Q8BTW3 273 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 PigmQ8C2R7 423 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Nrif2Q921B4 824 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Sf3b5Q923D4 86 aaKnown RBP11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Spef1Q99JL1 234 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 SvbpQ99LQ4 66 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Lingo1Q9D1T0 614 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 GrinaQ9ESF4 345 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 VcanQ62059 3357 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Trbv15A0A0A6YYE3 115 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr685A0A1L1SVG7 331 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Mptx2D3YYJ7 219 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr430E9Q5F1 317 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 D430019H16RikJ3QPM6 83 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Ca6P18761 317 aa11.12□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Supt4h1aP63271 117 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms