RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	LMO1	P25800	156 aa		11.96	□□□□□ -0.5
PHGDH-233	ENST00000642021	SSR4	P51571	173 aa		11.96	□□□□□ -0.5
PHGDH-233	ENST00000642021	CALHM1	Q8IU99	346 aa		11.96	□□□□□ -0.5
PHGDH-233	ENST00000642021	SLC35G3	Q8N808	338 aa		11.96	□□□□□ -0.5
PHGDH-233	ENST00000642021	CCDC54	Q8NEL0	328 aa		11.96	□□□□□ -0.5
PHGDH-233	ENST00000642021	C19orf12	Q9NSK7	152 aa		11.96	□□□□□ -0.5
PHGDH-233	ENST00000642021	TMEM38B	Q9NVV0	291 aa		11.96	□□□□□ -0.5
PHGDH-233	ENST00000642021	RCL1	Q9Y2P8	373 aa	Known RBP	11.96	□□□□□ -0.5
PHGDH-233	ENST00000642021	FBXO7	Q9Y3I1	522 aa		11.96	□□□□□ -0.5
PHGDH-233	ENST00000642021	OR6C6	A6NF89	314 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	C5orf52	A6NGY3	159 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	ZNF587B	E7ETH6	402 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	CCL4	P13236	92 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	PAX6	P26367	422 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	DUSP1	P28562	367 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	PPP1CC	P36873	323 aa	Known RBP	11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	HTR5A	P47898	357 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	B3GALT5-AS1	P59052	145 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	RAB5B	P61020	215 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	SSPN	Q14714	243 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	TSC22D1	Q15714	1073 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	MEX3B	Q6ZN04	569 aa	Known RBP	11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	MR1	Q95460	341 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	MOB3A	Q96BX8	217 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	GPHA2	Q96T91	129 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	RGCC	Q9H4X1	137 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	BCO1	Q9HAY6	547 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	LUZP4	Q9P127	313 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	NSG1	A0A0A6YYJ2	146 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021		A0A1W2PPH5	198 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021		M0R036	132 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	ST8SIA3	O43173	380 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	PRH1	P02810	166 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	ARG1	P05089	322 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	FGF5	P12034	268 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	NPBWR2	P48146	333 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	GPR157	Q5UAW9	335 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	LHFPL2	Q6ZUX7	228 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	RPS19BP1	Q86WX3	136 aa	Known RBP	11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	PIGC	Q92535	297 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	UBE2Z	Q9H832	354 aa	Predicted RBP	11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	WDR54	Q9H977	334 aa		11.95	□□□□□ -0.5
PHGDH-233	ENST00000642021	FAM24A	A6NFZ4	105 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	ZNF716	A6NP11	495 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	CBR3	O75828	277 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	CST2	P09228	141 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	CXCL12	P48061	93 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	RAC3	P60763	192 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	KRBOX4	Q5JUW0	171 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	LGI3	Q8N145	548 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	OR4D5	Q8NGN0	318 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	ABHD14A	Q9BUJ0	271 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	ZNF700	Q9H0M5	742 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	hCG_38984	A0A1B0GV85	526 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	NKX2-6	A6NCS4	301 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	C1orf196	B1AJZ1	125 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	RFPL3S	P0C7P2	107 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	RGS19	P49795	217 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	KRTAP27-1	Q3LI81	207 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	SLC16A13	Q7RTY0	426 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	RARRES2	Q99969	163 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	ZNF286A	Q9HBT8	521 aa		11.94	□□□□□ -0.5
PHGDH-233	ENST00000642021	MUC3A	Q02505	3323 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	hCG_1809904	A0A1W2PP81	198 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021		A0A1W2PR64	198 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021		A0A1W2PRV1	198 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	UMAD1	C9J7I0	102 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	PDCD6	O75340	191 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	MT-ND4L	P03901	98 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	OR13C7	P0DN81	318 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	TCN2	P20062	427 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	AGA	P20933	346 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	CCL20	P78556	96 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	IL13RA2	Q14627	380 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	HMGN3	Q15651	99 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	CEACAM16	Q2WEN9	425 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	HLA-B	Q31612	363 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	GGN	Q86UU5	652 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	SUMF1	Q8NBK3	374 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	HS3ST6	Q96QI5	342 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	RSRP1	Q9BUV0	290 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	WNT16	Q9UBV4	365 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	CXCL13	O43927	109 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	OR7C1	O76099	320 aa	Predicted RBP	11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	GNRHR	P30968	328 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	CLDN15	P56746	228 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	CARD18	P57730	90 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	CLINT1	Q14677	625 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	PLCXD3	Q63HM9	321 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	FAM24B	Q8N5W8	94 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	FOXB1	Q99853	325 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	SYT3	Q9BQG1	590 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	SF3B5	Q9BWJ5	86 aa	Known RBP	11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	OR2H1	Q9GZK4	316 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	ZNF442	Q9H7R0	627 aa		11.93	□□□□□ -0.5
PHGDH-233	ENST00000642021	CBY1	Q9Y3M2	126 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms