RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 FBLN5Q9UBX5 448 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 ADAM30Q9UKF2 790 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 NPTNQ9Y639 398 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 PRKDCP78527 4128 aaKnown RBP7.86□□□□□ -1.15
PHGDH-228ENST00000641847 FAM25AB3EWG3 89 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 FAM25CB3EWG5 89 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 FAM25GB3EWG6 89 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 LYNX1G3V0Z9 82 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 IFNL4K9M1U5 179 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 CTDSP2O14595 271 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 NOS1APO75052 506 aaPredicted RBP7.86□□□□□ -1.15
PHGDH-228ENST00000641847 RP2O75695 350 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 ACAA1P09110 424 aaPredicted RBP7.86□□□□□ -1.15
PHGDH-228ENST00000641847 LYNX1P0DP58 116 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 DAOP14920 347 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 S100A5P33763 92 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 CFHR2P36980 270 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 RPS27AP62979 156 aaKnown RBP7.86□□□□□ -1.15
PHGDH-228ENST00000641847 HFEQ30201 348 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 SMIM21Q3B7S5 101 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 MIDNQ504T8 468 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 ELP2Q6IA86 826 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 METAP1DQ6UB28 335 aaPredicted RBP7.86□□□□□ -1.15
PHGDH-228ENST00000641847 FIP1L1Q6UN15 594 aaKnown RBP7.86□□□□□ -1.15
PHGDH-228ENST00000641847 C1orf87Q8N0U7 546 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 FAM58AQ8N1B3 248 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 GCSAMQ8N6F7 178 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 C19orf18Q8NEA5 215 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 Q8NFD4 153 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 OR6Q1Q8NGQ2 317 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 ZNF418Q8TF45 676 aaPredicted RBP7.86□□□□□ -1.15
PHGDH-228ENST00000641847 RDH5Q92781 318 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 YIPF5Q969M3 257 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 PTX4Q96A99 478 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 URM1Q9BTM9 101 aaKnown RBP7.86□□□□□ -1.15
PHGDH-228ENST00000641847 TM2D1Q9BX74 207 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 LPAR5Q9H1C0 372 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 ATG5Q9H1Y0 275 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 WDR13Q9H1Z4 485 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 RHOFQ9HBH0 211 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 HES4Q9HCC6 221 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 HMG20AQ9NP66 347 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 TMEM106BQ9NUM4 274 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 RASL12Q9NYN1 266 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 RAB22AQ9UL26 194 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 PEX16Q9Y5Y5 336 aa7.86□□□□□ -1.15
PHGDH-228ENST00000641847 VWFP04275 2813 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 IGHV3OR15-7A0A075B7D8 119 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 A0A0A6YYD4 124 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 TMEM89A2RUT3 159 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 CLDN25C9JDP6 229 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 TMEM178BH3BS89 294 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.85□□□□□ -1.15
PHGDH-228ENST00000641847 TRIM77I1YAP6 450 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 ZNF205O95201 554 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 KNG1P01042 644 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 LHBP01229 141 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 APOA1P02647 267 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 ELK1P19419 428 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 CPT2P23786 658 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 GABRR1P24046 479 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 COL8A2P25067 703 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 NR4A2P43354 598 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 RBM11P57052 281 aaKnown RBP7.85□□□□□ -1.15
PHGDH-228ENST00000641847 MRPS11P82912 194 aaKnown RBP7.85□□□□□ -1.15
PHGDH-228ENST00000641847 IKZF1Q13422 519 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 IL13RA2Q14627 380 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 CARTPTQ16568 116 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 NHLRC3Q5JS37 347 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 FAM201AQ5SY85 155 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 ACP7Q6ZNF0 438 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 LRRC28Q86X40 367 aaPredicted RBP7.85□□□□□ -1.15
PHGDH-228ENST00000641847 CMTM4Q8IZR5 234 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 OR51T1Q8NGJ9 327 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 FAM216AQ8WUB2 273 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 RAB40AQ8WXH6 277 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 SEH1LQ96EE3 360 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 MRPS24Q96EL2 167 aaKnown RBP7.85□□□□□ -1.15
PHGDH-228ENST00000641847 Q96M66 194 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 CMTM3Q96MX0 182 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 WDFY2Q96P53 400 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 JMJD8Q96S16 334 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 NICN1Q9BSH3 213 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 ABCG5Q9H222 651 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 NLKQ9UBE8 527 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 EXTL2Q9UBQ6 330 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 DNAJB11Q9UBS4 358 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 ST3GAL6Q9Y274 331 aa7.85□□□□□ -1.15
PHGDH-228ENST00000641847 MALRD1Q5VYJ5 2156 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 PPIAL4EA0A075B759 164 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 METTL21EPA6NDL7 271 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 OOEPA6NGQ2 149 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 PPIAL4DF5H284 164 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 GEMIN2O14893 280 aaKnown RBP7.84□□□□□ -1.15
PHGDH-228ENST00000641847 SCGNO76038 276 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 OR7C1O76099 320 aaPredicted RBP7.84□□□□□ -1.15
PHGDH-228ENST00000641847 PPIAL4FP0DN26 164 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 DUSP1P28562 367 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 TALDO1P37837 337 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 PITPNBP48739 271 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms