RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 SNAI3Q3KNW1 292 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.87□□□□□ -0.51
PAX6-280ENST00000640872 CDCP2Q5VXM1 449 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 C20orf196Q8IYI0 205 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 TMEM171Q8WVE6 324 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 HIST1H2BHQ93079 126 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 ZNF799Q96GE5 643 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 JSRP1Q96MG2 331 aaPredicted RBP11.87□□□□□ -0.51
PAX6-280ENST00000640872 HIST1H2BNQ99877 126 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 HIST1H2BMQ99879 126 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 METTL7AQ9H8H3 244 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 SEMA5BQ9P283 1151 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 LIPGQ9Y5X9 500 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 HS3ST3B1Q9Y662 390 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 CXorf65A6NEN9 183 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 BCAT2O15382 392 aaPredicted RBP11.87□□□□□ -0.51
PAX6-280ENST00000640872 SCAF4O95104 1147 aaKnown RBP11.87□□□□□ -0.51
PAX6-280ENST00000640872 CDS2O95674 445 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 CD38P28907 300 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 NOVA1P51513 510 aaKnown RBP11.87□□□□□ -0.51
PAX6-280ENST00000640872 DEFA6Q01524 100 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 CHAF1BQ13112 559 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 SGK3Q96BR1 496 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 PHF7Q9BWX1 381 aaPredicted RBP11.87□□□□□ -0.51
PAX6-280ENST00000640872 FGF21Q9NSA1 209 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 ADAMTS20P59510 1910 aa11.87□□□□□ -0.51
PAX6-280ENST00000640872 NKX2-6A6NCS4 301 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 HSPB1P04792 205 aaKnown RBP11.86□□□□□ -0.51
PAX6-280ENST00000640872 NR2C1P13056 603 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 ZNF506Q5JVG8 444 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 ASCL4Q6XD76 172 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 ZNF429Q86V71 674 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 PLXDC1Q8IUK5 500 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 CCDC71LQ8N9Z2 235 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 OR10AD1Q8NGE0 317 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 TMEM54Q969K7 222 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 SIRT7Q9NRC8 400 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 IGLV3-12A0A075B6K2 115 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 TGIF2-C20orf24A0A0A6YYL0 155 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 FAM221AA4D161 298 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 PNLIPP16233 465 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 HIST1H1BP16401 226 aaKnown RBP11.86□□□□□ -0.51
PAX6-280ENST00000640872 GUCA1AP43080 201 aaPredicted RBP11.86□□□□□ -0.51
PAX6-280ENST00000640872 MEX3BQ6ZN04 569 aaKnown RBP11.86□□□□□ -0.51
PAX6-280ENST00000640872 Q6ZPA2 131 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 CYB561D1Q8N8Q1 229 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 OR10D4PQ8NGN7 298 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 ZNF286AQ9HBT8 521 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 UNC13CQ8NB66 2214 aa11.86□□□□□ -0.51
PAX6-280ENST00000640872 FAM230AA0A1W2PPH8 454 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 ZNF732B4DXR9 585 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 TRDCB7Z8K6 153 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 GEMIN2O14893 280 aaKnown RBP11.85□□□□□ -0.51
PAX6-280ENST00000640872 MYF5P13349 255 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 AADACP22760 399 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 GLIPR1P48060 266 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 PIGYQ3MUY2 71 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 FAM69BQ5VUD6 431 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 BRICD5Q6PL45 260 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 ODF3L1Q8IXM7 274 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 HIST3H2BBQ8N257 126 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 OR13D1Q8NGV5 346 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 TVP23CQ96ET8 276 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 PLEKHF2Q9H8W4 249 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 GLRX2Q9NS18 164 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 LYRM2Q9NU23 88 aaPredicted RBP11.85□□□□□ -0.51
PAX6-280ENST00000640872 URGCP-MRPS24S4R325 110 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 FREM2Q5SZK8 3169 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 C3orf85A0A1B0GTC6 90 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 DUX1O43812 170 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 LY86O95711 162 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 ONECUT2O95948 504 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 SOD3P08294 240 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 CD63P08962 238 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 CD27P26842 260 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 NKX2-1P43699 371 aaPredicted RBP11.85□□□□□ -0.51
PAX6-280ENST00000640872 CEBPGP53567 150 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 SHBQ15464 509 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 DNLZQ5SXM8 178 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 DBX2Q6ZNG2 339 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 TMEM252Q8N6L7 170 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 C14orf144Q96I85 54 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 ZNF700Q9H0M5 742 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 HIPK2Q9H2X6 1198 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 UBE2ZQ9H832 354 aaPredicted RBP11.85□□□□□ -0.51
PAX6-280ENST00000640872 WSB1Q9Y6I7 421 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 RTTNQ86VV8 2226 aa11.85□□□□□ -0.51
PAX6-280ENST00000640872 ELOA3CA0A087WX78 387 aaPredicted RBP11.84□□□□□ -0.51
PAX6-280ENST00000640872 IGKV1-12A0A0C4DH73 117 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 ZNF587BE7ETH6 402 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 PROB1E7EW31 1015 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 MPPED1O15442 326 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 IGKV1D-12P01611 117 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 OMGP23515 440 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 SRPXP78539 464 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 H3F3AP84243 136 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 GFI1BQ5VTD9 330 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 CPEB2Q7Z5Q1 589 aaKnown RBP11.84□□□□□ -0.51
PAX6-280ENST00000640872 SLC35E3Q7Z769 313 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 FADS6Q8N9I5 356 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms