RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 C9J4A7 227 aa13.56□□□□□ -0.24
CACNA1A-235ENST00000637004 CLDN34H7C241 214 aa13.56□□□□□ -0.24
CACNA1A-235ENST00000637004 DVL1O14640 695 aa13.56□□□□□ -0.24
CACNA1A-235ENST00000637004 PHF1O43189 567 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-235ENST00000637004 RND2P52198 227 aa13.56□□□□□ -0.24
CACNA1A-235ENST00000637004 H3F3AP84243 136 aa13.56□□□□□ -0.24
CACNA1A-235ENST00000637004 TAF9Q16594 264 aa13.56□□□□□ -0.24
CACNA1A-235ENST00000637004 SP5Q6BEB4 398 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-235ENST00000637004 CLDND2Q8NHS1 167 aa13.56□□□□□ -0.24
CACNA1A-235ENST00000637004 LIN37Q96GY3 246 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-235ENST00000637004 HIPK2Q9H2X6 1198 aa13.56□□□□□ -0.24
CACNA1A-235ENST00000637004 DKKL1Q9UK85 242 aa13.56□□□□□ -0.24
CACNA1A-235ENST00000637004 PCNX3Q9H6A9 2034 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 H3BML4 177 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 DHRS3O75911 302 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 PDGFBP01127 241 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 DBHP09172 617 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 ANOS1P23352 680 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 SRPXP78539 464 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 JOSD1Q15040 202 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 USF2Q15853 346 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 TMEM31Q5JXX7 168 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 DPPA3Q6W0C5 159 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 VDAC3Q9Y277 283 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 GLI4P10075 376 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 OPRM1P35372 400 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 NKX2-1P43699 371 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 UCP3P55916 312 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 MFAP5Q13361 173 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 KCNMB1Q16558 191 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 ZNF385CQ66K41 422 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 TCEAL6Q6IPX3 200 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 SLC25A47Q6Q0C1 308 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 FAAP24Q9BTP7 215 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 SLC7A11Q9UPY5 501 aa13.55□□□□□ -0.24
CACNA1A-235ENST00000637004 IGSF23A1L1A6 192 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 IGLV3-1P01715 115 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 FOLR1P15328 257 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 CTSSP25774 331 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 NOVA1P51513 510 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 RRADP55042 308 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 SLC35G3Q8N808 338 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 RNASEH2CQ8TDP1 164 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 SPIN2AQ99865 258 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 SPIN2BQ9BPZ2 258 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 C11orf1Q9H5F2 150 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 CRLF2Q9HC73 371 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 RFNGQ9Y644 331 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 TECTAO75443 2155 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 PHF3Q92576 2039 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 A0A0U1RQV5 110 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 A8MWP6 167 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 PHOX2AO14813 284 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 TCAPO15273 167 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 FAHP16930 419 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 CD200P41217 278 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 VAMP2P63027 116 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 FOXF1Q12946 379 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 C4orf17Q53FE4 359 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 PIGTQ969N2 578 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 LYZL4Q96KX0 146 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 DUSP15Q9H1R2 295 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 ZNF160Q9HCG1 818 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 LYRM2Q9NU23 88 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 V9GYS6 101 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 SPTY2D1-AS1A0A0U1RR47 76 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 SEMA4FO95754 770 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 CYB5R3P00387 301 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 QDPRP09417 244 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 EDN3P14138 238 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 OMGP23515 440 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 TMEM183AQ8IXX5 376 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 CMTM1Q8IZ96 169 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 CARFQ8N187 725 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 TMEM252Q8N6L7 170 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 BEND2Q8NDZ0 799 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 OR5L2Q8NGL0 311 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 C10orf35Q96D05 121 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 MVB12AQ96EY5 273 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 ABHD14BQ96IU4 210 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 SNX22Q96L94 193 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 NDUFAF3Q9BU61 184 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 METTL9Q9H1A3 318 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 SMOC1Q9H4F8 434 aa13.54□□□□□ -0.24
CACNA1A-235ENST00000637004 KNL1Q8NG31 2342 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 TRBV24-1A0A075B6N3 115 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 IGHV5-51A0A0C4DH38 117 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 C2orf72A6NCS6 295 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 CARD17Q5XLA6 110 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 MEX3BQ6ZN04 569 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 OR5C1Q8NGR4 320 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 TMEM171Q8WVE6 324 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 LRP4O75096 1905 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 MSTNO14793 375 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 OPN1MWP04001 364 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 PGA5P0DJD9 388 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 OPN1MW2P0DN77 364 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 OPN1MW3P0DN78 364 aa13.53□□□□□ -0.24
CACNA1A-235ENST00000637004 CEACAM1P13688 526 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms