RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PPIHO43447 177 aaKnown RBP10□□□□□ -0.81
CLN6-217ENST00000636964 CD3DP04234 171 aa10□□□□□ -0.81
CLN6-217ENST00000636964 ZNF345Q14585 488 aa10□□□□□ -0.81
CLN6-217ENST00000636964 C11orf87Q6NUJ2 197 aa10□□□□□ -0.81
CLN6-217ENST00000636964 ASCL5Q7RTU5 278 aa10□□□□□ -0.81
CLN6-217ENST00000636964 SLC16A14Q7RTX9 510 aa10□□□□□ -0.81
CLN6-217ENST00000636964 CLCC1Q96S66 551 aa10□□□□□ -0.81
CLN6-217ENST00000636964 RSRP1Q9BUV0 290 aa10□□□□□ -0.81
CLN6-217ENST00000636964 PRO1933Q9H354 126 aa10□□□□□ -0.81
CLN6-217ENST00000636964 UQCC1Q9NVA1 299 aa10□□□□□ -0.81
CLN6-217ENST00000636964 ATMQ13315 3056 aa10□□□□□ -0.81
CLN6-217ENST00000636964 KANTRA0A1W2PQU2 76 aa10□□□□□ -0.81
CLN6-217ENST00000636964 XKRY2A2RUG3 117 aa10□□□□□ -0.81
CLN6-217ENST00000636964 PTBP3O95758 552 aaKnown RBP10□□□□□ -0.81
CLN6-217ENST00000636964 IGHV2-5P01817 119 aa10□□□□□ -0.81
CLN6-217ENST00000636964 CDKN1BP46527 198 aa10□□□□□ -0.81
CLN6-217ENST00000636964 HIST1H3AP68431 136 aa10□□□□□ -0.81
CLN6-217ENST00000636964 PSG4Q00888 419 aa10□□□□□ -0.81
CLN6-217ENST00000636964 MOGAT2Q3SYC2 334 aa10□□□□□ -0.81
CLN6-217ENST00000636964 HIST2H3PS2Q5TEC6 136 aa10□□□□□ -0.81
CLN6-217ENST00000636964 HIST2H3AQ71DI3 136 aa10□□□□□ -0.81
CLN6-217ENST00000636964 STEAP2Q8NFT2 490 aa10□□□□□ -0.81
CLN6-217ENST00000636964 HIST1H2BAQ96A08 127 aa10□□□□□ -0.81
CLN6-217ENST00000636964 PHYHIPLQ96FC7 376 aa10□□□□□ -0.81
CLN6-217ENST00000636964 NUDT11Q96G61 164 aa10□□□□□ -0.81
CLN6-217ENST00000636964 SLCO5A1Q9H2Y9 848 aa10□□□□□ -0.81
CLN6-217ENST00000636964 BCO1Q9HAY6 547 aa10□□□□□ -0.81
CLN6-217ENST00000636964 TMEM100Q9NV29 134 aa10□□□□□ -0.81
CLN6-217ENST00000636964 SPRR3Q9UBC9 169 aa10□□□□□ -0.81
CLN6-217ENST00000636964 MYO7BQ6PIF6 2116 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 A0A1B0GW55 424 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 DUX4L2P0CJ85 424 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 DUX4L3P0CJ86 424 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 DUX4L4P0CJ87 422 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 DUX4L5P0CJ88 424 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 DUX4L6P0CJ89 424 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 DUX4L7P0CJ90 424 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 MNDAP41218 407 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 F2RL1P55085 397 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 PGAP1Q75T13 922 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 TMEM178AQ8NBL3 297 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 PACRGQ96M98 296 aaPredicted RBP9.99□□□□□ -0.81
CLN6-217ENST00000636964 SEC11CQ9BY50 192 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 DUX4Q9UBX2 424 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 TRGV5A0A0B4J1U4 118 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 FAHP16930 419 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 CTSSP25774 331 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 ACTBP60709 375 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 ACTG1P63261 375 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 ARF1P84077 181 aaKnown RBP9.99□□□□□ -0.81
CLN6-217ENST00000636964 ANGPTL5Q86XS5 388 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 LYPD6Q86Y78 171 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 OR5AP2Q8NGF4 316 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 OR5D18Q8NGL1 313 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 OR14K1Q8NGZ2 314 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 OR8S1Q8NH09 359 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 RCC2Q9P258 522 aaKnown RBP9.99□□□□□ -0.81
CLN6-217ENST00000636964 SPENQ96T58 3664 aaKnown RBP9.99□□□□□ -0.81
CLN6-217ENST00000636964 SYNGR3O43761 229 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 FARS2O95363 451 aaKnown RBP9.99□□□□□ -0.81
CLN6-217ENST00000636964 CST2P09228 141 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 FAM157CP0CG43 387 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 AGAP20933 346 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 ZNF93P35789 620 aaPredicted RBP9.99□□□□□ -0.81
CLN6-217ENST00000636964 HTR5AP47898 357 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 PEA15Q15121 130 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 CDNFQ49AH0 187 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 DOK3Q7L591 496 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 NUFIP2Q7Z417 695 aaKnown RBP9.99□□□□□ -0.81
CLN6-217ENST00000636964 OR5AS1Q8N127 324 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 CCDC54Q8NEL0 328 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 OR5M8Q8NGP6 311 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 RNASE8Q8TDE3 154 aaKnown RBP9.99□□□□□ -0.81
CLN6-217ENST00000636964 SPTSSAQ969W0 71 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 CMBLQ96DG6 245 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 NRIP2Q9BQI9 281 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 RHBDD3Q9Y3P4 386 aa9.99□□□□□ -0.81
CLN6-217ENST00000636964 OR2F2O95006 317 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 LCATP04180 440 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 SLC25A4P12235 298 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 THBS4P35443 961 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 UBE2G2P60604 165 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 SRSF4Q08170 494 aaKnown RBP9.98□□□□□ -0.81
CLN6-217ENST00000636964 OR2F1Q13607 317 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 C1orf100Q5SVJ3 147 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 ADGRE4PQ86SQ3 457 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 OR1F12Q8NHA8 337 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 PPP1R1CQ8WVI7 109 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 GSX1Q9H4S2 264 aaPredicted RBP9.98□□□□□ -0.81
CLN6-217ENST00000636964 SLC17A5Q9NRA2 495 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 IGKV3D-15A0A087WSY6 115 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 IGKV1-9A0A0C4DH69 117 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 CFPP27918 469 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 OTX1P32242 354 aaPredicted RBP9.98□□□□□ -0.81
CLN6-217ENST00000636964 SCAND1P57086 179 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 PMPCAQ10713 525 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 RAB35Q15286 201 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 AWAT2Q6E213 333 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 C14orf79Q96F83 325 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 GPER1Q99527 375 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms