RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 PPP1R3EQ9H7J1 279 aa5.62□□□□□ -1.51
UPF3B-205ENST00000636792 ZNF665Q9H7R5 613 aa5.62□□□□□ -1.51
UPF3B-205ENST00000636792 PATZ1Q9HBE1 687 aaKnown RBP5.62□□□□□ -1.51
UPF3B-205ENST00000636792 RCC2Q9P258 522 aaKnown RBP5.62□□□□□ -1.51
UPF3B-205ENST00000636792 ADAM30Q9UKF2 790 aa5.62□□□□□ -1.51
UPF3B-205ENST00000636792 RAB22AQ9UL26 194 aa5.62□□□□□ -1.51
UPF3B-205ENST00000636792 HSF4Q9ULV5 492 aa5.62□□□□□ -1.51
UPF3B-205ENST00000636792 POLR3KQ9Y2Y1 108 aaPredicted RBP5.62□□□□□ -1.51
UPF3B-205ENST00000636792 AK6Q9Y3D8 172 aaKnown RBP5.62□□□□□ -1.51
UPF3B-205ENST00000636792 TRBV23-1A0A0A0MS06 115 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 DPPA5A6NC42 116 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 PPIHO43447 177 aaKnown RBP5.61□□□□□ -1.51
UPF3B-205ENST00000636792 SPRY1O43609 319 aaPredicted RBP5.61□□□□□ -1.51
UPF3B-205ENST00000636792 ANGPTL7O43827 346 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 CDC14BO60729 498 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 ECDO95905 644 aaPredicted RBP5.61□□□□□ -1.51
UPF3B-205ENST00000636792 HAND1O96004 215 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 APOA1P02647 267 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 SFTPBP07988 381 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 PSG2P11465 335 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 BCL3P20749 454 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 SERPINA2P20848 420 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 GATA3P23771 443 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 COL8A2P25067 703 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 OR10A3P58181 314 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 LSM3P62310 102 aaKnown RBP5.61□□□□□ -1.51
UPF3B-205ENST00000636792 RPS27AP62979 156 aaKnown RBP5.61□□□□□ -1.51
UPF3B-205ENST00000636792 ZMYND11Q15326 602 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 SLC22A6Q4U2R8 563 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 UBE2NLQ5JXB2 153 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 BAIAP2L2Q6UXY1 529 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 SPNS3Q6ZMD2 512 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 ZNF788Q6ZQV5 615 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 ZNF826PQ6ZT77 177 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 ZNF554Q86TJ5 538 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 NR2C2APQ86WQ0 139 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 OR8H2Q8N162 312 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 FAM89BQ8N5H3 189 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 OR51D1Q8NGF3 324 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 ANGPTL6Q8NI99 470 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 NRGNQ92686 78 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 FAM46BQ96A09 425 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 RFT1Q96AA3 541 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 PHF21AQ96BD5 680 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 C1orf159Q96HA4 380 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 SNX22Q96L94 193 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 GAL3ST1Q99999 423 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 BPESC1Q9GZL8 116 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 ELL3Q9HB65 397 aaPredicted RBP5.61□□□□□ -1.51
UPF3B-205ENST00000636792 TMEM165Q9HC07 324 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 RAB9BQ9NP90 201 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.61□□□□□ -1.51
UPF3B-205ENST00000636792 RBFOX1Q9NWB1 397 aaKnown RBP5.61□□□□□ -1.51
UPF3B-205ENST00000636792 DAPK2Q9UIK4 370 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 ZNF222Q9UK12 451 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 MGAT4AQ9UM21 535 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 ST3GAL6Q9Y274 331 aa5.61□□□□□ -1.51
UPF3B-205ENST00000636792 ASH1LQ9NR48 2969 aaKnown RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 ABCA12Q86UK0 2595 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 IGKV1D-17A0A075B6S4 117 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 A0A1W2PPH5 198 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 ISPDA4D126 451 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 CEACAM18A8MTB9 384 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 SERPINE3A8MV23 424 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 TNFRSF13BO14836 293 aaPredicted RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 MGST3O14880 152 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 NDUFS7O75251 213 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 PDCD6O75340 191 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 FOXH1O75593 365 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 CRTAPO75718 401 aaPredicted RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 HTR3BO95264 441 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 MPIG6BO95866 241 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 CYB5R3P00387 301 aaPredicted RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 PLATP00750 562 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 IGHV2-5P01817 119 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 RPS2P15880 293 aaKnown RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 EGR1P18146 543 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 USF1P22415 310 aaPredicted RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 ERP29P30040 261 aaKnown RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 CD80P33681 288 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 MNDAP41218 407 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 NPBWR2P48146 333 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 ART1P52961 327 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 MRPS10P82664 201 aaKnown RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 PITPNAQ00169 270 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 MXD1Q05195 221 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 MEF2CQ06413 473 aaPredicted RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 UNC119Q13432 240 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 SPCS2Q15005 226 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 C2orf76Q3KRA6 126 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 TMEM30BQ3MIR4 351 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 ESCO2Q56NI9 601 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 SPRNQ5BIV9 151 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 LRRC10Q5BKY1 277 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 IDNKQ5T6J7 187 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 HES5Q5TA89 166 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 CD276Q5ZPR3 534 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 TRAT1Q6PIZ9 186 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 MOB1BQ7L9L4 216 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 TEX29Q8N6K0 151 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms