RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 LIN37Q96GY3 246 aaPredicted RBP6□□□□□ -1.45
SCN1A-213ENST00000636759 HCFC2Q9Y5Z7 792 aa6□□□□□ -1.45
SCN1A-213ENST00000636759 IGHV1-69-2A0A0G2JMI3 117 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 A0A0U1RQK1 487 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 ST8SIA3O43173 380 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 GDF9O60383 454 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 HYPMO75409 117 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 IGLC2P0DOY2 106 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 IGLC3P0DOY3 106 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 GNB3P16520 340 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 CSNK2A2P19784 350 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-213ENST00000636759 GABRA3P34903 492 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 MPLP40238 635 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 DUSP3P51452 185 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-213ENST00000636759 LCN6P62502 163 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 SUPT4H1P63272 117 aaKnown RBP5.99□□□□□ -1.45
SCN1A-213ENST00000636759 PAX2Q02962 417 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 MSMO1Q15800 293 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 PRSS8Q16651 343 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 TMEM225Q6GV28 225 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 SYT13Q7L8C5 426 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 ZNF764Q96H86 408 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-213ENST00000636759 TAS2R4Q9NYW5 299 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 TMEM14AQ9Y6G1 99 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 GOLGA4Q13439 2230 aaKnown RBP5.99□□□□□ -1.45
SCN1A-213ENST00000636759 C9orf172C9J069 976 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 RAB29O14966 203 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 RBFOX2O43251 390 aaKnown RBP eCLIP5.99□□□□□ -1.45
SCN1A-213ENST00000636759 C1orf105O95561 183 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 HPNP05981 417 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 C8orf89P0DMQ9 161 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 BCL2P10415 239 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 FAHP16930 419 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 CFPP27918 469 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 CDKN1AP38936 164 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 BIDP55957 195 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 SHBQ15464 509 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 ZNF547Q8IVP9 402 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 C1orf174Q8IYL3 243 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 OR4S2Q8NH73 311 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 PTX4Q96A99 478 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 C4orf45Q96LM5 186 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 LRFN3Q9BTN0 628 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 PARLQ9H300 379 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 PRR32B1ATL7 298 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 SLC25A17O43808 307 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 ADH1BP00325 375 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 OMGP23515 440 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 PSMB5P28074 263 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 ARF3P61204 181 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-213ENST00000636759 ARF1P84077 181 aaKnown RBP5.99□□□□□ -1.45
SCN1A-213ENST00000636759 RHOGP84095 191 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 LRRC73Q5JTD7 316 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 SULF2Q8IWU5 870 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 OR5AR1Q8NGP9 310 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 OR1E3Q8WZA6 343 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 SCAMP4Q969E2 229 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 MRPL24Q96A35 216 aaKnown RBP5.99□□□□□ -1.45
SCN1A-213ENST00000636759 ARRDC3Q96B67 414 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 LRRC3BQ96PB8 259 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 NRTNQ99748 197 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 TUBD1Q9UJT1 453 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 MRPS16Q9Y3D3 137 aaKnown RBP5.99□□□□□ -1.45
SCN1A-213ENST00000636759 LRP12Q9Y561 859 aa5.99□□□□□ -1.45
SCN1A-213ENST00000636759 MRPS18BQ9Y676 258 aaKnown RBP5.99□□□□□ -1.45
SCN1A-213ENST00000636759 A0A1B0GUS0 222 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 LINC01553A4QN01 128 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 ZNF891A8MT65 544 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-213ENST00000636759 TSPAN6O43657 245 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 TMPRSS11DO60235 418 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 CDS2O95674 445 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 SEMA4FO95754 770 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 EPHA8P29322 1005 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-213ENST00000636759 TSPOP30536 169 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 BSGP35613 385 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 MRPS34P82930 218 aaKnown RBP5.98□□□□□ -1.45
SCN1A-213ENST00000636759 IL13RA2Q14627 380 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 EXOSC7Q15024 291 aaKnown RBP5.98□□□□□ -1.45
SCN1A-213ENST00000636759 GAB4Q2WGN9 574 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 WDR38Q5JTN6 314 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 VAX1Q5SQQ9 334 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 PLPP4Q5VZY2 271 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 ZNF787Q6DD87 383 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 FAM166AQ6J272 317 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 SAXO1Q8IYX7 474 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 LINC01555Q8NAE3 123 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 STXBP6Q8NFX7 210 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 VN1R2Q8NFZ6 395 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 PSMF1Q92530 271 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 BADQ92934 168 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 ANAPC16Q96DE5 110 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 ATP5SQ99766 215 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 FAM103A1Q9BTL3 118 aaKnown RBP5.98□□□□□ -1.45
SCN1A-213ENST00000636759 SRA1Q9HD15 236 aaKnown RBP5.98□□□□□ -1.45
SCN1A-213ENST00000636759 G6PC2Q9NQR9 355 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 CISD1Q9NZ45 108 aaKnown RBP5.98□□□□□ -1.45
SCN1A-213ENST00000636759 A0A0C4DFX4 3053 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 TNFSF15O95150 251 aa5.98□□□□□ -1.45
SCN1A-213ENST00000636759 ZNF10P21506 573 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-213ENST00000636759 GCH1P30793 250 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms