RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 DOPEY2Q9Y3R5 2298 aa13.4□□□□□ -0.26
CLN8-209ENST00000635970 MSGN1A6NI15 193 aa13.4□□□□□ -0.27
CLN8-209ENST00000635970 FAM90A27PA6NNH2 459 aa13.4□□□□□ -0.27
CLN8-209ENST00000635970 UBE2CO00762 179 aa13.4□□□□□ -0.27
CLN8-209ENST00000635970 RAMP1O60894 148 aa13.4□□□□□ -0.27
CLN8-209ENST00000635970 MT-ND4LP03901 98 aa13.4□□□□□ -0.27
CLN8-209ENST00000635970 BMP5P22003 454 aa13.4□□□□□ -0.27
CLN8-209ENST00000635970 FKBP2P26885 142 aaKnown RBP13.4□□□□□ -0.27
CLN8-209ENST00000635970 CSNK2A1P68400 391 aaPredicted RBP13.4□□□□□ -0.27
CLN8-209ENST00000635970 FAM3AP98173 230 aa13.4□□□□□ -0.27
CLN8-209ENST00000635970 PPA1Q15181 289 aa13.4□□□□□ -0.27
CLN8-209ENST00000635970 ZNF251Q9BRH9 671 aa13.4□□□□□ -0.27
CLN8-209ENST00000635970 RTBDNQ9BSG5 229 aaPredicted RBP13.4□□□□□ -0.27
CLN8-209ENST00000635970 OR5AC2Q9NZP5 309 aa13.4□□□□□ -0.27
CLN8-209ENST00000635970 C5orf52A6NGY3 159 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 LIPT2A6NK58 231 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 KCNAB3O43448 404 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 CDC14BO60729 498 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 MED6O75586 246 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 EIF3GO75821 320 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLN8-209ENST00000635970 FCGR2AP12318 317 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 CHRNB4P30926 498 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 OR3A2P47893 321 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 SUPT4H1P63272 117 aaKnown RBP13.39□□□□□ -0.27
CLN8-209ENST00000635970 SMCO1Q147U7 214 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 GLIPR1L1Q6UWM5 242 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 LINC00346Q8IVM7 164 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 ZNF808Q8N4W9 903 aaPredicted RBP13.39□□□□□ -0.27
CLN8-209ENST00000635970 TMEM59Q9BXS4 323 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 TMEM231Q9H6L2 316 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 C1orf123Q9NWV4 160 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 KLHL13Q9P2N7 655 aa13.39□□□□□ -0.27
CLN8-209ENST00000635970 MRPS28Q9Y2Q9 187 aaKnown RBP13.39□□□□□ -0.27
CLN8-209ENST00000635970 SPTBN1Q01082 2364 aaKnown RBP13.38□□□□□ -0.27
CLN8-209ENST00000635970 A1L4Q6 167 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 CA11O75493 328 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 F12P00748 615 aaPredicted RBP13.38□□□□□ -0.27
CLN8-209ENST00000635970 S100A6P06703 90 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 PTGFRP43088 359 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 NPY4RP50391 375 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 RAB32Q13637 225 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 SLC9A3R2Q15599 337 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 VWA1Q6PCB0 445 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 CNEP1R1Q8N9A8 125 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 OR13C9Q8NGT0 318 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 CA5BP1Q8WTZ4 195 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 KIRREL1Q96J84 757 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 OR2S2Q9NQN1 319 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 NBPF19A0A087WUL8 3843 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 HCFC1P51610 2035 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 A0A1W2PNV4 684 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 NKX2-6A6NCS4 301 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 ADAP1O75689 374 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 TNFSF13O75888 250 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 NFYBP25208 207 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 CTSSP25774 331 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 LPAR6P43657 344 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 HABP2Q14520 560 aaPredicted RBP13.38□□□□□ -0.27
CLN8-209ENST00000635970 ANKRD55Q3KP44 614 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 PLAC9Q5JTB6 97 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 THEM4Q5T1C6 240 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 TMEM268Q5VZI3 342 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 ABLIM2Q6H8Q1 611 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 CHST11Q9NPF2 352 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 EDARQ9UNE0 448 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 B3GALT5Q9Y2C3 310 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 FAM96BQ9Y3D0 163 aa13.38□□□□□ -0.27
CLN8-209ENST00000635970 FAM157AC9JC47 383 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 MPIG6BO95866 241 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 ACAA1P09110 424 aaPredicted RBP13.37□□□□□ -0.27
CLN8-209ENST00000635970 HKR1P10072 659 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 HLA-DOBP13765 273 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 AMY2BP19961 511 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 KIR2DL2P43627 348 aaPredicted RBP13.37□□□□□ -0.27
CLN8-209ENST00000635970 SLC35A1P78382 337 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 H3F3AP84243 136 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 GUSBP1Q15486 140 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 OR2A2Q6IF42 318 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 FAM89BQ8N5H3 189 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 C2CD4CQ8TF44 421 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 C11orf40Q8WZ69 217 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 ZNF775Q96BV0 537 aaPredicted RBP13.37□□□□□ -0.27
CLN8-209ENST00000635970 OR10C1Q96KK4 312 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 C1orf147Q96MC9 270 aaPredicted RBP13.37□□□□□ -0.27
CLN8-209ENST00000635970 PLEKHA2Q9HB19 425 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 CACFD1Q9UGQ2 172 aa13.37□□□□□ -0.27
CLN8-209ENST00000635970 C14orf166Q9Y224 244 aaKnown RBP13.37□□□□□ -0.27
CLN8-209ENST00000635970 BAHCC1Q9P281 2608 aa13.36□□□□□ -0.27
CLN8-209ENST00000635970 A0A0A6YYD4 124 aa13.36□□□□□ -0.27
CLN8-209ENST00000635970 ZNF878C9JN71 531 aa13.36□□□□□ -0.27
CLN8-209ENST00000635970 CYTIPO60759 359 aa13.36□□□□□ -0.27
CLN8-209ENST00000635970 CLDN14O95500 239 aa13.36□□□□□ -0.27
CLN8-209ENST00000635970 CLDN1O95832 211 aa13.36□□□□□ -0.27
CLN8-209ENST00000635970 RCC1P18754 421 aaPredicted RBP13.36□□□□□ -0.27
CLN8-209ENST00000635970 LAP3P28838 519 aa13.36□□□□□ -0.27
CLN8-209ENST00000635970 ALDH3B1P43353 468 aa13.36□□□□□ -0.27
CLN8-209ENST00000635970 ZNF84P51523 738 aa13.36□□□□□ -0.27
CLN8-209ENST00000635970 AADACL3Q5VUY0 350 aa13.36□□□□□ -0.27
CLN8-209ENST00000635970 RPL7L1Q6DKI1 246 aaKnown RBP13.36□□□□□ -0.27
CLN8-209ENST00000635970 MCEMP1Q8IX19 187 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms