RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 IGHV3-9P01782 118 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 GDF1P27539 372 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 ASCL1P50553 236 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 RPS18P62269 152 aaKnown RBP9.25□□□□□ -0.93
PSPC1-207ENST00000635251 TRA2AQ13595 282 aaKnown RBP eCLIP9.25□□□□□ -0.93
PSPC1-207ENST00000635251 OR8B8Q15620 311 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 TMEM211Q6ICI0 200 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 SLC25A26Q70HW3 274 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 CALHM1Q8IU99 346 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 LILRB2Q8N423 598 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 TP53RKQ96S44 253 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 RSRP1Q9BUV0 290 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 SH3BGRL3Q9H299 93 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 SPACA1Q9HBV2 294 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 ZDHHC8Q9ULC8 765 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 UBE2J1Q9Y385 318 aaPredicted RBP9.25□□□□□ -0.93
PSPC1-207ENST00000635251 STRAPQ9Y3F4 350 aaKnown RBP9.25□□□□□ -0.93
PSPC1-207ENST00000635251 MED19A0JLT2 244 aaPredicted RBP9.25□□□□□ -0.93
PSPC1-207ENST00000635251 C1orf196B1AJZ1 125 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 YKT6O15498 198 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 C1QL1O75973 258 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 CCNOP22674 350 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 DUSP3P51452 185 aaPredicted RBP9.25□□□□□ -0.93
PSPC1-207ENST00000635251 KRTAP27-1Q3LI81 207 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 AWAT1Q58HT5 328 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 IGSF11Q5DX21 431 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 ABLIM2Q6H8Q1 611 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 TMEM182Q6ZP80 229 aaPredicted RBP9.25□□□□□ -0.93
PSPC1-207ENST00000635251 TECTBQ96PL2 329 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 C20orf24Q9BUV8 137 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 FAM86C1Q9NVL1 165 aa9.25□□□□□ -0.93
PSPC1-207ENST00000635251 MYO7BQ6PIF6 2116 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 PQLC2LA1A4F0 135 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 ZNF587BE7ETH6 402 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 MPPED1O15442 326 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 F10P00742 488 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 EDN3P14138 238 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 ZNF44P15621 663 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 NPBWR2P48146 333 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 RAB5CP51148 216 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 EWSR1Q01844 656 aaKnown RBP eCLIP9.24□□□□□ -0.93
PSPC1-207ENST00000635251 DPPA2Q7Z7J5 298 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 ZNF695Q8IW36 515 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 ZNF565Q8N9K5 539 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 SUMF1Q8NBK3 374 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 DMBX1Q8NFW5 382 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 FAM213BQ8TBF2 198 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 ABHD3Q8WU67 409 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 PRUNE2Q8WUY3 3088 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 SFT2D1Q8WV19 159 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 ZNF845Q96IR2 970 aaPredicted RBP9.24□□□□□ -0.93
PSPC1-207ENST00000635251 PBDC1Q9BVG4 233 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 PAPOLGQ9BWT3 736 aaKnown RBP9.24□□□□□ -0.93
PSPC1-207ENST00000635251 COA4Q9NYJ1 87 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 NKX2-6A6NCS4 301 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 FAM24AA6NFZ4 105 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 PATE3B3GLJ2 98 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 TRDCB7Z8K6 153 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 RPL36A-HNRNPH2H7BZ11 118 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 NTN3O00634 580 aaPredicted RBP9.24□□□□□ -0.93
PSPC1-207ENST00000635251 IGHEP01854 428 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 IFNA4P05014 189 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 S100A6P06703 90 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 PTAFRP25105 342 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 CTAG1AP78358 180 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 SRPXP78539 464 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 ZFP36L1Q07352 338 aaKnown RBP9.24□□□□□ -0.93
PSPC1-207ENST00000635251 KRBOX4Q5JUW0 171 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 RIPPLY2Q5TAB7 128 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 C9orf135Q5VTT2 229 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 CDCP2Q5VXM1 449 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 OR4D5Q8NGN0 318 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 MAFAQ8NHW3 353 aaPredicted RBP9.24□□□□□ -0.93
PSPC1-207ENST00000635251 CD300LFQ8TDQ1 290 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 NEK7Q8TDX7 302 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 EXTL1Q92935 676 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 SLAMF9Q96A28 289 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 IER2Q9BTL4 223 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 FBXO7Q9Y3I1 522 aa9.24□□□□□ -0.93
PSPC1-207ENST00000635251 C7orf77A4D0Y5 90 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 LRRC3CA6NJW4 275 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 UMAD1C9J7I0 102 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 FOLR2P14207 255 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 BCL3P20749 454 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 NKX2-1P43699 371 aaPredicted RBP9.23□□□□□ -0.93
PSPC1-207ENST00000635251 CLDN15P56746 228 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 SNRPEP62304 92 aaKnown RBP9.23□□□□□ -0.93
PSPC1-207ENST00000635251 HABP2Q14520 560 aaPredicted RBP9.23□□□□□ -0.93
PSPC1-207ENST00000635251 CLINT1Q14677 625 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 Q6ZPA2 131 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 TBC1D26Q86UD7 250 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 FAM185AQ8N0U4 392 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 OR2C3Q8N628 320 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 SVIPQ8NHG7 77 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 HIST1H2BAQ96A08 127 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 CPNE4Q96A23 557 aaPredicted RBP9.23□□□□□ -0.93
PSPC1-207ENST00000635251 ADGRG7Q96K78 797 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 RNF122Q9H9V4 155 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 KCNJ16Q9NPI9 418 aa9.23□□□□□ -0.93
PSPC1-207ENST00000635251 SLC7A10Q9NS82 523 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms