RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 ANXA8P13928 327 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 PRKACAP17612 351 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 CCL1P22362 96 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 CD34P28906 385 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 OR3A1P47881 315 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 NPBWR2P48146 333 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 PRRX1P54821 245 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 GP2P55259 537 aaKnown RBP12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 RAB25P57735 213 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 RBM39Q14498 530 aaKnown RBP12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 ZNF146Q15072 292 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 HLA-DRB5Q30154 266 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 SLC35F2Q8IXU6 374 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 HS3ST5Q8IZT8 346 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 NOL4LQ96MY1 436 aaPredicted RBP12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 P2RX4Q99571 388 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 MNTQ99583 582 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 ADI1Q9BV57 179 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 MED4Q9NPJ6 270 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 TAS2R3Q9NYW6 316 aa12.38□□□□□ -0.43
PDLIM3-213ENST00000629667 TRBV2A0A0J9YWF9 115 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 SERPINE3A8MV23 424 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 OOSP1A8MZH6 123 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 B2RBV5 119 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 SIRPB1O00241 398 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 ENTPD6O75354 484 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 CALCBP10092 127 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 BCL3P20749 454 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 PRKACGP22612 351 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 CDC42P60953 191 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 SLC35B1P78383 322 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 SPIN3Q5JUX0 258 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 MEPCEQ7L2J0 689 aaKnown RBP12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 OR4D6Q8NGJ1 314 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 CORO2AQ92828 525 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 CHST5Q9GZS9 411 aa12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 H2AFY2Q9P0M6 372 aaPredicted RBP12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 MRM2Q9UI43 246 aaKnown RBP12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 LSM4Q9Y4Z0 139 aaKnown RBP12.37□□□□□ -0.43
PDLIM3-213ENST00000629667 LY6LH3BQJ8 138 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 SH2D1BO14796 132 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 DCTN3O75935 186 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 GDNFP39905 211 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 PTGFRP43088 359 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 POU3F4P49335 361 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 RBP2P50120 134 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 ATP1B3P54709 279 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 AESQ08117 197 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 NKAPLQ5M9Q1 402 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 ZNF695Q8IW36 515 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 COMMD1Q8N668 190 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 YIPF7Q8N8F6 280 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 RPEQ96AT9 228 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 DUX3Q96PT4 197 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 ADGRL4Q9HBW9 690 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 EXOSC4Q9NPD3 245 aaKnown RBP12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 CLN6Q9NWW5 311 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 LINC00527Q9UJ94 153 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 GSTK1Q9Y2Q3 226 aa12.36□□□□□ -0.43
PDLIM3-213ENST00000629667 CCL24O00175 119 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 PRKYO43930 277 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 OR2H2O95918 312 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 KRT8P05787 483 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 SNRNP70P08621 437 aaKnown RBP12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 GLIPR1P48060 266 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 CRISP1P54107 249 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 HES1Q14469 280 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 BCDIN3DQ7Z5W3 292 aaKnown RBP12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 CATSPERDQ86XM0 798 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 THNSL2Q86YJ6 484 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 ADGRG5Q8IZF4 528 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 CCDC54Q8NEL0 328 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 OR56B4Q8NH76 319 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 TOMM40LQ969M1 308 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 CCDC124Q96CT7 223 aaKnown RBP12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 ASB9Q96DX5 294 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 PRR25Q96S07 402 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 ASCL2Q99929 193 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 PRRG3Q9BZD7 231 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 PCDHB16Q9NRJ7 776 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 ARL2BPQ9Y2Y0 163 aa12.35□□□□□ -0.43
PDLIM3-213ENST00000629667 A0A087X0M5 115 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 A0A1B0GX30 115 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 FAM90A18PA6NE21 464 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 FAM90A16PA6NEW6 464 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 FAM90A20PA6NIJ5 464 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 FAM90A9PA6NNJ1 464 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 FAM90A12PA8MX19 464 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 FAM90A5PA8MXJ8 464 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 FAM90A15PP0C7V4 464 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 FAM90A13PP0C7W8 464 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 FAM90A14PP0C7W9 464 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 FAM90A24PP0C7X0 464 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 TMEM11P17152 192 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 NFYBP25208 207 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 LUMP51884 338 aaPredicted RBP12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 MTCP1P56278 107 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 SLC35E3Q7Z769 313 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 FOXRED2Q8IWF2 684 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 C5orf56Q8N8D9 126 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms