RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 TMEM82A0PJX8 343 aa16.76■□□□□ 0.27
PTCD3-220ENST00000627371 HTR3BO95264 441 aa16.76■□□□□ 0.27
PTCD3-220ENST00000627371 OR2H2O95918 312 aa16.76■□□□□ 0.27
PTCD3-220ENST00000627371 CSTBP04080 98 aaKnown RBP16.76■□□□□ 0.27
PTCD3-220ENST00000627371 FAM157CP0CG43 387 aa16.76■□□□□ 0.27
PTCD3-220ENST00000627371 SRP14P37108 136 aaKnown RBP16.76■□□□□ 0.27
PTCD3-220ENST00000627371 IL13RA2Q14627 380 aa16.76■□□□□ 0.27
PTCD3-220ENST00000627371 AWAT2Q6E213 333 aa16.76■□□□□ 0.27
PTCD3-220ENST00000627371 GLIPR1L1Q6UWM5 242 aa16.76■□□□□ 0.27
PTCD3-220ENST00000627371 C17orf107Q6ZR85 190 aa16.76■□□□□ 0.27
PTCD3-220ENST00000627371 OR8H2Q8N162 312 aa16.76■□□□□ 0.27
PTCD3-220ENST00000627371 TBC1D15Q8TC07 691 aa16.76■□□□□ 0.27
PTCD3-220ENST00000627371 VCX3AQ9NNX9 186 aa16.76■□□□□ 0.27
PTCD3-220ENST00000627371 PCDHB16Q9NRJ7 776 aa16.76■□□□□ 0.27
PTCD3-220ENST00000627371 PSPNO60542 156 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 FSHBP01225 129 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 CD37P11049 281 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 SERPINA2P20848 420 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 LMO1P25800 156 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 GPR176Q14439 515 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 SLC22A6Q4U2R8 563 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 NHLRC3Q5JS37 347 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 Q6P435 159 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 OSR2Q8N2R0 312 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 CHST4Q8NCG5 386 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 OR5D13Q8NGL4 314 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 UPRTQ96BW1 309 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 C1orf147Q96MC9 270 aaPredicted RBP16.75■□□□□ 0.27
PTCD3-220ENST00000627371 NR1H4Q96RI1 486 aaPredicted RBP16.75■□□□□ 0.27
PTCD3-220ENST00000627371 STUB1Q9UNE7 303 aa16.75■□□□□ 0.27
PTCD3-220ENST00000627371 TRIM64CA6NLI5 447 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 SIRPB1O00241 398 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 ZNF44P15621 663 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 GABRR1P24046 479 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 RIPPLY3P57055 190 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 PIGYQ3MUY2 71 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 C1orf100Q5SVJ3 147 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 KIR3DL3Q8N743 410 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 PPP1R35Q8TAP8 253 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 NANPQ8TBE9 248 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 GFI1Q99684 422 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 GHRLQ9UBU3 117 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 KPTNQ9Y664 436 aa16.74■□□□□ 0.27
PTCD3-220ENST00000627371 A0A1W2PP11 408 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 A0A1W2PQ09 198 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 GTF2F2P13984 249 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 MMP9P14780 707 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 FGF9P31371 208 aaPredicted RBP16.73■□□□□ 0.27
PTCD3-220ENST00000627371 RBM11P57052 281 aaKnown RBP16.73■□□□□ 0.27
PTCD3-220ENST00000627371 RPL31P62899 125 aaKnown RBP16.73■□□□□ 0.27
PTCD3-220ENST00000627371 GRK1Q15835 563 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 METTL11BQ5VVY1 283 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 GDPD3Q7L5L3 318 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 LINC00596Q86U02 117 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 WDFY2Q96P53 400 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 CHST6Q9GZX3 395 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 SIRPDQ9H106 197 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 C19orf12Q9NSK7 152 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 ONECUT1Q9UBC0 465 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 ST3GAL6Q9Y274 331 aa16.73■□□□□ 0.27
PTCD3-220ENST00000627371 AK6Q9Y3D8 172 aaKnown RBP16.73■□□□□ 0.27
PTCD3-220ENST00000627371 TRAV1-2A0A0B4J238 106 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 A0A0G2JK05 382 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 SLC33A1O00400 549 aaPredicted RBP16.72■□□□□ 0.27
PTCD3-220ENST00000627371 MGST3O14880 152 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 DEGS1O15121 323 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 SLC22A1O15245 554 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 TOX4O94842 621 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 UBBP0CG47 229 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 MYL9P24844 172 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 OR3A1P47881 315 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 ARF6P62330 175 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 SCN1BQ07699 218 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 C22orf42Q6IC83 251 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 FAM185AQ8N0U4 392 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 OR4S1Q8NGB4 309 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 OR4M1Q8NGD0 313 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 OR6M1Q8NGM8 313 aa16.72■□□□□ 0.27
PTCD3-220ENST00000627371 MRPS24Q96EL2 167 aaKnown RBP16.72■□□□□ 0.27
PTCD3-220ENST00000627371 TXNL4BQ9NX01 149 aaKnown RBP16.72■□□□□ 0.27
PTCD3-220ENST00000627371 SHISA3A0PJX4 238 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 CSN2P05814 226 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 CD36P16671 472 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 JUNBP17275 347 aaPredicted RBP16.71■□□□□ 0.27
PTCD3-220ENST00000627371 HTR2CP28335 458 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 EDDM3BP56851 147 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 PDCD1Q15116 288 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 KIAA2026Q5HYC2 2103 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 KLF17Q5JT82 389 aaPredicted RBP16.71■□□□□ 0.27
PTCD3-220ENST00000627371 CMTM4Q8IZR5 234 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 TBX15Q96SF7 602 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 PCGF1Q9BSM1 259 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 IFT22Q9H7X7 185 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 SSR3Q9UNL2 185 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 JMJD1CQ15652 2540 aa16.71■□□□□ 0.27
PTCD3-220ENST00000627371 M0R1W7 72 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 SLC17A2O00624 439 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 PDCD5O14737 125 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 GEMIN2O14893 280 aaKnown RBP16.7■□□□□ 0.26
PTCD3-220ENST00000627371 ERP29P30040 261 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms