RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 OSR2Q8N2R0 312 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 ZNF561Q8N587 486 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 CD177Q8N6Q3 437 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 BEX2Q9BXY8 128 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 SHARPINQ9H0F6 387 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 CST11Q9H112 138 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 RNF167Q9H6Y7 350 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 SLC25A10Q9UBX3 287 aaPredicted RBP12.22□□□□□ -0.45
PNKP-221ENST00000627317 TRAV20A0A0B4J274 112 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 A0A1W2PP11 408 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 BPNT1O95861 308 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 CHRM2P08172 466 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 CD37P11049 281 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 ZNF44P15621 663 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 NDUFB7P17568 137 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 GABRR1P24046 479 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 RBM11P57052 281 aaKnown RBP12.21□□□□□ -0.45
PNKP-221ENST00000627317 COL10A1Q03692 680 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 MXD1Q05195 221 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 SCN1BQ07699 218 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 IL13RA2Q14627 380 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 PIGYQ3MUY2 71 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 HES5Q5TA89 166 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 GPR107Q5VW38 600 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 ZNF841Q6ZN19 808 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 ZNRF1Q8ND25 227 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 Q8NFD4 153 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 C1orf147Q96MC9 270 aaPredicted RBP12.21□□□□□ -0.45
PNKP-221ENST00000627317 METRNQ9UJH8 293 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 ST3GAL6Q9Y274 331 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 MAB21L2Q9Y586 359 aa12.21□□□□□ -0.45
PNKP-221ENST00000627317 LOC105371242A0A075B767 164 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 IFITM5A6NNB3 132 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 NOTOA8MTQ0 251 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 AIPO00170 330 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 SIRPB1O00241 398 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 OR2H2O95918 312 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 MGMTP16455 207 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 ZFP36P26651 326 aaKnown RBP12.2□□□□□ -0.46
PNKP-221ENST00000627317 CLDN12P56749 244 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 NHLRC3Q5JS37 347 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 CD276Q5ZPR3 534 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 ANKRD13BQ86YJ7 626 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 OR51T1Q8NGJ9 327 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 H1FXQ92522 213 aaKnown RBP12.2□□□□□ -0.46
PNKP-221ENST00000627317 FAM46BQ96A09 425 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 TMEM186Q96B77 213 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 MRPS24Q96EL2 167 aaKnown RBP12.2□□□□□ -0.46
PNKP-221ENST00000627317 SELENOIQ9C0D9 397 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 BANF2Q9H503 90 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 SEBOXQ9HB31 216 aaPredicted RBP12.2□□□□□ -0.46
PNKP-221ENST00000627317 HIF1ANQ9NWT6 349 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 STEAP1Q9UHE8 339 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 DOCK11Q5JSL3 2073 aa12.2□□□□□ -0.46
PNKP-221ENST00000627317 DEGS1O15121 323 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 GPR37O15354 613 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 ENSAO43768 121 aaKnown RBP12.19□□□□□ -0.46
PNKP-221ENST00000627317 OR7C1O76099 320 aaPredicted RBP12.19□□□□□ -0.46
PNKP-221ENST00000627317 GABARAPO95166 117 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 MPIG6BO95866 241 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 CLEC2LP0C7M8 214 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 ARSBP15848 533 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 SRD5A1P18405 259 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 CAV3P56539 151 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 NCS1P62166 190 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 OR10K2Q6IF99 312 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 SLC16A12Q6ZSM3 486 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 LINC00596Q86U02 117 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 NR2C2APQ86WQ0 139 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 CLVS1Q8IUQ0 354 aaPredicted RBP12.19□□□□□ -0.46
PNKP-221ENST00000627317 FGFRL1Q8N441 504 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 CHST4Q8NCG5 386 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 TMEM104Q8NE00 496 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 KCNG3Q8TAE7 436 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 PPP1R35Q8TAP8 253 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 SLC25A28Q96A46 364 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 FAM3DQ96BQ1 224 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 SNX22Q96L94 193 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 TMEM59Q9BXS4 323 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 FAM234AQ9H0X4 552 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 KCNK15Q9H427 330 aa12.19□□□□□ -0.46
PNKP-221ENST00000627317 WNK2Q9Y3S1 2297 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 A0A0G2JK05 382 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 A0A0G2JMP0 313 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 A0A0X1KG70 313 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 TMEM82A0PJX8 343 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 C22orf46C9J442 243 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 K7N7A8 449 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 GEMIN2O14893 280 aaKnown RBP12.18□□□□□ -0.46
PNKP-221ENST00000627317 NOL3O60936 208 aaKnown RBP12.18□□□□□ -0.46
PNKP-221ENST00000627317 ZNF737O75373 536 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 FCN3O75636 299 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 ECDO95905 644 aaPredicted RBP12.18□□□□□ -0.46
PNKP-221ENST00000627317 IFNA2P01563 188 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 TK1P04183 234 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 VSIG8P0DPA2 414 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 CFPP27918 469 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 TGFBR1P36897 503 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 SERPINB10P48595 397 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 VBP1P61758 197 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms