RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 PRAMEF20Q5VT98 475 aa11.3□□□□□ -0.6
PSME3-217ENST00000622892 SLC22A25Q6T423 547 aa11.3□□□□□ -0.6
PSME3-217ENST00000622892 MUCL1Q96DR8 90 aa11.3□□□□□ -0.6
PSME3-217ENST00000622892 DUSP23Q9BVJ7 150 aa11.3□□□□□ -0.6
PSME3-217ENST00000622892 GPR61Q9BZJ8 451 aa11.3□□□□□ -0.6
PSME3-217ENST00000622892 PARPBPQ9NWS1 579 aa11.3□□□□□ -0.6
PSME3-217ENST00000622892 A0A1B0GX78 115 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 RBFOX3A6NFN3 312 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 ZNF729A6NN14 1252 aaPredicted RBP11.29□□□□□ -0.6
PSME3-217ENST00000622892 DHRS3O75911 302 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 HEXBP07686 556 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 ATP6V0CP27449 155 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 ERVFRD-1P60508 538 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 SNAI3Q3KNW1 292 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 PIGYQ3MUY2 71 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 C4orf17Q53FE4 359 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 MALSU1Q96EH3 234 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 MVB12AQ96EY5 273 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 Q96M66 194 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 FAM86C1Q9NVL1 165 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 GAR1Q9NY12 217 aaKnown RBP11.29□□□□□ -0.6
PSME3-217ENST00000622892 DMRT1Q9Y5R6 373 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 A0A1W2PNV4 684 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 K7N7A8 449 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 GEMIN2O14893 280 aaKnown RBP11.29□□□□□ -0.6
PSME3-217ENST00000622892 SLC34A2O95436 690 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 DUSP1P28562 367 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 CDX1P47902 265 aaPredicted RBP11.29□□□□□ -0.6
PSME3-217ENST00000622892 RUNX1Q01196 453 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 DEFA6Q01524 100 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 EWSR1Q01844 656 aaKnown RBP eCLIP11.29□□□□□ -0.6
PSME3-217ENST00000622892 LIAT1Q6ZQX7 453 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 SLC35G3Q8N808 338 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 ZNF501Q96CX3 271 aaPredicted RBP11.29□□□□□ -0.6
PSME3-217ENST00000622892 TM2D1Q9BX74 207 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 NECAP2Q9NVZ3 263 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 PLEK2Q9NYT0 353 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 HS3ST3B1Q9Y662 390 aa11.29□□□□□ -0.6
PSME3-217ENST00000622892 TNFSF12O43508 249 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 GRB2P62993 217 aaKnown RBP11.28□□□□□ -0.6
PSME3-217ENST00000622892 DLK1P80370 383 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 GNMTQ14749 295 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 GPR157Q5UAW9 335 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 CYB561D1Q8N8Q1 229 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 OR6X1Q8NH79 312 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 NTNG2Q96CW9 530 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 ZNF837Q96EG3 531 aaPredicted RBP11.28□□□□□ -0.6
PSME3-217ENST00000622892 TP53RKQ96S44 253 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 CHST5Q9GZS9 411 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 SLC7A11Q9UPY5 501 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 STRAPQ9Y3F4 350 aaKnown RBP11.28□□□□□ -0.6
PSME3-217ENST00000622892 NKX2-6A6NCS4 301 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 CYB5BO43169 146 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 GATCO43716 136 aaKnown RBP11.28□□□□□ -0.6
PSME3-217ENST00000622892 OR2J2O76002 312 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 TRGC2P03986 189 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 RAB1AP62820 205 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 MSI2Q96DH6 328 aaKnown RBP11.28□□□□□ -0.6
PSME3-217ENST00000622892 YPEL4Q96NS1 127 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 EML6Q6ZMW3 1958 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 CXorf65A6NEN9 183 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 ZNF724A8MTY0 619 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 RNF224P0DH78 156 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 SLC16A14Q7RTX9 510 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 D2HGDHQ8N465 521 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 C17orf78Q8N4C9 275 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 KDF1Q8NAX2 398 aaPredicted RBP11.28□□□□□ -0.6
PSME3-217ENST00000622892 TMEM171Q8WVE6 324 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 S100PBPQ96BU1 408 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 TREM2Q9NZC2 230 aa11.28□□□□□ -0.6
PSME3-217ENST00000622892 DIDO1Q9BTC0 2240 aaKnown RBP11.28□□□□□ -0.6
PSME3-217ENST00000622892 OTOGLQ3ZCN5 2332 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 IGKV1-27A0A075B6S5 117 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 IGSF23A1L1A6 192 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 M0R135 149 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 RRP8O43159 456 aaKnown RBP11.27□□□□□ -0.6
PSME3-217ENST00000622892 CER1O95813 267 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 SUCLG1P53597 346 aaKnown RBP11.27□□□□□ -0.6
PSME3-217ENST00000622892 PPA1Q15181 289 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 ELOBQ15370 118 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 SPSB3Q6PJ21 355 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 ZNF429Q86V71 674 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 OR2C3Q8N628 320 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 ZNF799Q96GE5 643 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 MRGPRX4Q96LA9 322 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 OXGR1Q96P68 337 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 ZNF385AQ96PM9 386 aaKnown RBP11.27□□□□□ -0.6
PSME3-217ENST00000622892 PRO1933Q9H354 126 aa11.27□□□□□ -0.6
PSME3-217ENST00000622892 GVINP1Q7Z2Y8 2422 aa11.27□□□□□ -0.61
PSME3-217ENST00000622892 SSSCA1O60232 199 aa11.27□□□□□ -0.61
PSME3-217ENST00000622892 HIST1H2BKO60814 126 aa11.27□□□□□ -0.61
PSME3-217ENST00000622892 HIST1H2BJP06899 126 aa11.27□□□□□ -0.61
PSME3-217ENST00000622892 PATE4P0C8F1 98 aa11.27□□□□□ -0.61
PSME3-217ENST00000622892 MDKP21741 143 aaPredicted RBP11.27□□□□□ -0.61
PSME3-217ENST00000622892 HIST1H2BOP23527 126 aa11.27□□□□□ -0.61
PSME3-217ENST00000622892 HIST1H2BBP33778 126 aa11.27□□□□□ -0.61
PSME3-217ENST00000622892 ALDH3B1P43353 468 aa11.27□□□□□ -0.61
PSME3-217ENST00000622892 HIST1H2BDP58876 126 aa11.27□□□□□ -0.61
PSME3-217ENST00000622892 HIST1H2BCP62807 126 aa11.27□□□□□ -0.61
PSME3-217ENST00000622892 HIST2H2BEQ16778 126 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms