RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SERPINB11Q96P15 392 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 CYTH2Q99418 400 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 LHX5Q9H2C1 402 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 DHX35Q9H5Z1 703 aaKnown RBP2.67□□□□□ -1.98
CPNE3-213ENST00000622183 FAM60AQ9NP50 221 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 IFT46Q9NQC8 304 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 RBM12B-AS1Q9P1G2 102 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 DHCR7Q9UBM7 475 aaKnown RBP2.67□□□□□ -1.98
CPNE3-213ENST00000622183 SLC22A14Q9Y267 594 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 SNX24Q9Y343 169 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 SCN1AP35498 2009 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 BRCA1P38398 1863 aaKnown RBP2.67□□□□□ -1.98
CPNE3-213ENST00000622183 MAP3K19Q56UN5 1328 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 SIGLEC1Q9BZZ2 1709 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 GOLGA8IPA6NC78 632 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 GMNCA6NCL1 334 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 IQCF5A8MTL0 148 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 UBDO15205 165 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 CNMDO75829 334 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 MYO1DO94832 1006 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 S100A6P06703 90 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 OR2B6P58173 313 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 RBX1P62877 108 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 TPBGQ13641 420 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 ZBTB6Q15916 424 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 FAM131AQ6UXB0 335 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 FA2HQ7L5A8 372 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 LRRC6Q86X45 466 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 LYPD1Q8N2G4 141 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 RORBQ92753 470 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 YIPF5Q969M3 257 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 PPP1R36Q96LQ0 422 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 PITX2Q99697 317 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 POMKQ9H5K3 350 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 INIPQ9NRY2 104 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 FADS3Q9Y5Q0 445 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 ZNF780BQ9Y6R6 833 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 PTPRGP23470 1445 aa2.66□□□□□ -1.98
CPNE3-213ENST00000622183 USP42Q9H9J4 1324 aaKnown RBP2.66□□□□□ -1.98
CPNE3-213ENST00000622183 COL1A2P08123 1366 aa2.65□□□□□ -1.98
CPNE3-213ENST00000622183 MYBPHLA2RUH7 354 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 K7EPK0 472 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 CRXO43186 299 aaPredicted RBP2.65□□□□□ -1.99
CPNE3-213ENST00000622183 SGCEO43556 437 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 BRI3O95415 125 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 IGLV3-19P01714 112 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 SLC35E2BP0CK96 405 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 M6PRP20645 277 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 HLA-DMAP28067 261 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 AQP5P55064 265 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 RWDD2BP57060 319 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 KRTAP10-8P60410 259 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 ANGPT1Q15389 498 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 GLYATQ6IB77 296 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 C8orf74Q6P047 294 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 GALNT10Q86SR1 603 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 ZFP62Q8NB50 900 aaPredicted RBP2.65□□□□□ -1.99
CPNE3-213ENST00000622183 OR6K3Q8NGY3 331 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 SEC22CQ9BRL7 303 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 SUCNR1Q9BXA5 334 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 PARVGQ9HBI0 331 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 TSPOAP1O95153 1857 aa2.65□□□□□ -1.99
CPNE3-213ENST00000622183 A0A1B0GX12 115 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 ERICH2A1L162 156 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 PGPA6NDG6 321 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 RGS5O15539 181 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 KCNK2O95069 426 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 FSTL3O95633 263 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 SLC2A1P11166 492 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 PRTN3P24158 256 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 ELK4P28324 431 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 TSPOP30536 169 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 MAGEA6P43360 314 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 PRKCDQ05655 676 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 FLOT2Q14254 428 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 IGFBP7Q16270 282 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 TMEM69Q5SWH9 247 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 ZNF470Q6ECI4 717 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 SGPP2Q8IWX5 399 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 PHF10Q8WUB8 498 aaKnown RBP2.64□□□□□ -1.99
CPNE3-213ENST00000622183 MFSD1Q9H3U5 465 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 ZNF706Q9Y5V0 76 aaPredicted RBP2.64□□□□□ -1.99
CPNE3-213ENST00000622183 NCOA3Q9Y6Q9 1424 aa2.64□□□□□ -1.99
CPNE3-213ENST00000622183 FABP7O15540 132 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 IGKV5-2P06315 115 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 GP1BAP07359 652 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 SCGB1C2P0DMR2 95 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 HBG1P69891 147 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 HBG2P69892 147 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 TTMPQ5BVD1 217 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 TMEM215Q68D42 235 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 ZFAND6Q6FIF0 208 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 LAMTOR1Q6IAA8 161 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 ERICH5Q6P6B1 374 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 ZNF773Q6PK81 442 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 TMEM136Q6ZRR5 245 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 OR2K2Q8NGT1 345 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 ANGPTL6Q8NI99 470 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 SCGB1C1Q8TD33 95 aa2.63□□□□□ -1.99
CPNE3-213ENST00000622183 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms