RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TIMM29Q9BSF4 260 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 MAP1LC3BQ9GZQ8 125 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 FGF22Q9HCT0 170 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 TMEM9BQ9NQ34 198 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 C1orf123Q9NWV4 160 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 MRPS18BQ9Y676 258 aaKnown RBP9.07□□□□□ -0.96
VPS11-207ENST00000620429 LOC102723971A0A1B0GUV8 181 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 CNOT4O95628 575 aaKnown RBP9.07□□□□□ -0.96
VPS11-207ENST00000620429 ZNF117Q03924 483 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 FAM53BQ14153 422 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 SMIM21Q3B7S5 101 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 GLYATL3Q5SZD4 288 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 ZNF776Q68DI1 518 aaPredicted RBP9.07□□□□□ -0.96
VPS11-207ENST00000620429 LINC00114Q6XXX2 140 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 MEX3BQ6ZN04 569 aaKnown RBP9.07□□□□□ -0.96
VPS11-207ENST00000620429 RD3Q7Z3Z2 195 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 CISD2Q8N5K1 135 aaKnown RBP9.07□□□□□ -0.96
VPS11-207ENST00000620429 TMEM52Q8NDY8 209 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 OR5L1Q8NGL2 311 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 TSEN15Q8WW01 171 aaKnown RBP9.07□□□□□ -0.96
VPS11-207ENST00000620429 CLEC1BQ9P126 229 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 UQCR10Q9UDW1 63 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 LSM5Q9Y4Y9 91 aaKnown RBP9.07□□□□□ -0.96
VPS11-207ENST00000620429 FAM230AA0A1W2PPH8 454 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 GPR89AB7ZAQ6 455 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 BPNT1O95861 308 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 GPR89BP0CG08 455 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 TCN2P20062 427 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 TNFSF4P23510 183 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 CTRLP40313 264 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 RPL23AP62750 156 aaKnown RBP9.06□□□□□ -0.96
VPS11-207ENST00000620429 PRAMEF20Q5VT98 475 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 RNF44Q7L0R7 432 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 IL22RA1Q8N6P7 574 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 OR4N2Q8NGD1 307 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 OR4D6Q8NGJ1 314 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 NT5CQ8TCD5 201 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 ELSPBP1Q96BH3 223 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 C4orf45Q96LM5 186 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 Q9N2K0 584 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 SOHLH2Q9NX45 425 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 OR6C3Q9NZP0 311 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 AK3Q9UIJ7 227 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 ANAPC10Q9UM13 185 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 WIPI2Q9Y4P8 454 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 A0A1W2PQF6 199 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 ZNF320A2RRD8 509 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 RNF212BA8MTL3 300 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 ATXN7O15265 892 aaPredicted RBP9.06□□□□□ -0.96
VPS11-207ENST00000620429 SEMA4FO95754 770 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 GPR75O95800 540 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 HBE1P02100 147 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 CD55P08174 381 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 CCKBRP32239 447 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 RPS21P63220 83 aaKnown RBP9.06□□□□□ -0.96
VPS11-207ENST00000620429 PAFAH1B2P68402 229 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 MPV17LQ2QL34 196 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 PRICKLE4Q2TBC4 344 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 WDR73Q6P4I2 378 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 TCF24Q7RTU0 167 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 PRSS41Q7RTY9 318 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 MCEMP1Q8IX19 187 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 PRSS33Q8NF86 280 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 OR52R1Q8NGF1 315 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 OR6N2Q8NGY6 317 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 CCL4L1Q8NHW4 92 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 FNDC9Q8TBE3 224 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 ASB5Q8WWX0 329 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 TMEM234Q8WY98 164 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 APOOQ9BUR5 198 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 GPR84Q9NQS5 396 aa9.06□□□□□ -0.96
VPS11-207ENST00000620429 C17orf105B2RV13 164 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 C9orf172C9J069 976 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 H7C1C5 153 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 NKX2-2O95096 273 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 PDGFBP01127 241 aaPredicted RBP9.05□□□□□ -0.96
VPS11-207ENST00000620429 SMIM10L1P0DMW3 83 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 FSTP19883 344 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 CSNK1A1P48729 337 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 LCN6P62502 163 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 NSDHLQ15738 373 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 WDR25Q64LD2 544 aaPredicted RBP9.05□□□□□ -0.96
VPS11-207ENST00000620429 TMEM225Q6GV28 225 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 FDX2Q6P4F2 183 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 UNQ5815/PRO19632Q6UWF5 114 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 LHFPL1Q86WI0 220 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 OR2G3Q8NGZ4 309 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 FAM216AQ8WUB2 273 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 SMIM10Q96HG1 83 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 LOXL4Q96JB6 756 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 RASL10BQ96S79 203 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 CMKLR1Q99788 373 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 MRPL27Q9P0M9 148 aaKnown RBP9.05□□□□□ -0.96
VPS11-207ENST00000620429 SLC17A4Q9Y2C5 497 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 RCL1Q9Y2P8 373 aaKnown RBP9.05□□□□□ -0.96
VPS11-207ENST00000620429 MYO15AQ9UKN7 3530 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 VSTM2BA6NLU5 285 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 IGKV1D-16P01601 117 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 IGFBP3P17936 291 aaPredicted RBP9.05□□□□□ -0.96
VPS11-207ENST00000620429 ZNF10P21506 573 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms