RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 WIPF2Q8TF74 440 aaPredicted RBP17.74■□□□□ 0.43
SRRT-218ENST00000620394 HMG20AQ9NP66 347 aa17.74■□□□□ 0.43
SRRT-218ENST00000620394 ABCB10Q9NRK6 738 aa17.74■□□□□ 0.43
SRRT-218ENST00000620394 SERTAD4Q9NUC0 356 aa17.74■□□□□ 0.43
SRRT-218ENST00000620394 PITPNC1Q9UKF7 332 aa17.74■□□□□ 0.43
SRRT-218ENST00000620394 IGKV1-12A0A0C4DH73 117 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 SNTNA6NMZ2 147 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 KDM4BO94953 1096 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 IGKV1D-12P01611 117 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 PRKACAP17612 351 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 DUSP1P28562 367 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 P2RX3P56373 397 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 KIAA2026Q5HYC2 2103 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 ZNF676Q8N7Q3 588 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 LGALS12Q96DT0 336 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 C4orf36Q96KX1 117 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 COMMD4Q9H0A8 199 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 TMEM133Q9H2Q1 129 aa17.73■□□□□ 0.43
SRRT-218ENST00000620394 UBE2J1Q9Y385 318 aaPredicted RBP17.73■□□□□ 0.43
SRRT-218ENST00000620394 FBXO24O75426 580 aa17.72■□□□□ 0.43
SRRT-218ENST00000620394 VSIG10L2P0DP72 767 aa17.72■□□□□ 0.43
SRRT-218ENST00000620394 RAB13P51153 203 aa17.72■□□□□ 0.43
SRRT-218ENST00000620394 EMX1Q04741 257 aaPredicted RBP17.72■□□□□ 0.43
SRRT-218ENST00000620394 ALKBH1Q13686 389 aaKnown RBP17.72■□□□□ 0.43
SRRT-218ENST00000620394 KPNB1Q14974 876 aaKnown RBP17.72■□□□□ 0.43
SRRT-218ENST00000620394 NSUN5P1Q3KNT7 163 aa17.72■□□□□ 0.43
SRRT-218ENST00000620394 SYS1Q8N2H4 156 aa17.72■□□□□ 0.43
SRRT-218ENST00000620394 CBR4Q8N4T8 237 aa17.72■□□□□ 0.43
SRRT-218ENST00000620394 OR4F17Q8NGA8 305 aa17.72■□□□□ 0.43
SRRT-218ENST00000620394 OR4F4Q96R69 305 aa17.72■□□□□ 0.43
SRRT-218ENST00000620394 CLEC7AQ9BXN2 247 aa17.72■□□□□ 0.43
SRRT-218ENST00000620394 RHOFQ9HBH0 211 aa17.72■□□□□ 0.43
SRRT-218ENST00000620394 GLS2Q9UI32 602 aa17.72■□□□□ 0.43
SRRT-218ENST00000620394 OR2H2O95918 312 aa17.71■□□□□ 0.43
SRRT-218ENST00000620394 LMO1P25800 156 aa17.71■□□□□ 0.43
SRRT-218ENST00000620394 DYNC1I2Q13409 638 aaKnown RBP17.71■□□□□ 0.43
SRRT-218ENST00000620394 ZIK1Q3SY52 487 aaPredicted RBP17.71■□□□□ 0.43
SRRT-218ENST00000620394 ZBTB49Q6ZSB9 765 aa17.71■□□□□ 0.43
SRRT-218ENST00000620394 TMEM219Q86XT9 240 aa17.71■□□□□ 0.43
SRRT-218ENST00000620394 NDUFA11Q86Y39 141 aa17.71■□□□□ 0.43
SRRT-218ENST00000620394 SAXO1Q8IYX7 474 aa17.71■□□□□ 0.43
SRRT-218ENST00000620394 OR4P4Q8NGL7 312 aa17.71■□□□□ 0.43
SRRT-218ENST00000620394 OR13C3Q8NGS6 347 aa17.71■□□□□ 0.43
SRRT-218ENST00000620394 OR13C9Q8NGT0 318 aa17.71■□□□□ 0.43
SRRT-218ENST00000620394 MRPL48Q96GC5 212 aaKnown RBP17.71■□□□□ 0.43
SRRT-218ENST00000620394 NKX3-1Q99801 234 aaPredicted RBP17.71■□□□□ 0.43
SRRT-218ENST00000620394 ZNF649Q9BS31 505 aa17.71■□□□□ 0.43
SRRT-218ENST00000620394 EXOSC4Q9NPD3 245 aaKnown RBP17.71■□□□□ 0.43
SRRT-218ENST00000620394 FAM90A22PA8MWA6 464 aa17.7■□□□□ 0.42
SRRT-218ENST00000620394 J3QLW9 94 aa17.7■□□□□ 0.42
SRRT-218ENST00000620394 CSN2P05814 226 aa17.7■□□□□ 0.42
SRRT-218ENST00000620394 DBTP11182 482 aaKnown RBP17.7■□□□□ 0.42
SRRT-218ENST00000620394 ZNF19P17023 458 aa17.7■□□□□ 0.42
SRRT-218ENST00000620394 GALEQ14376 348 aa17.7■□□□□ 0.42
SRRT-218ENST00000620394 HABP2Q14520 560 aaPredicted RBP17.7■□□□□ 0.42
SRRT-218ENST00000620394 RNF144BQ7Z419 303 aa17.7■□□□□ 0.42
SRRT-218ENST00000620394 LYG1Q8N1E2 194 aa17.7■□□□□ 0.42
SRRT-218ENST00000620394 RFT1Q96AA3 541 aa17.7■□□□□ 0.42
SRRT-218ENST00000620394 MYCBPQ99417 103 aaPredicted RBP17.7■□□□□ 0.42
SRRT-218ENST00000620394 ALG8Q9BVK2 526 aa17.7■□□□□ 0.42
SRRT-218ENST00000620394 MMP28Q9H239 520 aa17.7■□□□□ 0.42
SRRT-218ENST00000620394 AASSQ9UDR5 926 aa17.7■□□□□ 0.42
SRRT-218ENST00000620394 DNAH3Q8TD57 4116 aa17.7■□□□□ 0.42
SRRT-218ENST00000620394 SIRPB1O00241 398 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 F2RL2O00254 374 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 SH2D1BO14796 132 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 MMP23AO75900 390 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 RPSAP08865 295 aaKnown RBP17.69■□□□□ 0.42
SRRT-218ENST00000620394 CALCBP10092 127 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 JUNBP17275 347 aaPredicted RBP17.69■□□□□ 0.42
SRRT-218ENST00000620394 SNU13P55769 128 aaKnown RBP17.69■□□□□ 0.42
SRRT-218ENST00000620394 CORO2AQ92828 525 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 R3HDM4Q96D70 268 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 SPACA5Q96QH8 159 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 WNT10AQ9GZT5 417 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 GAL3ST2Q9H3Q3 398 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 ZCCHC4Q9H5U6 513 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 INPP5EQ9NRR6 644 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 TAS2R3Q9NYW6 316 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 GSTK1Q9Y2Q3 226 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 GMPPBQ9Y5P6 360 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 RYR3Q15413 4870 aa17.69■□□□□ 0.42
SRRT-218ENST00000620394 MPZL2O60487 215 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 CD34P28906 385 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 ZP1P60852 638 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 MRPL28Q13084 256 aaKnown RBP17.68■□□□□ 0.42
SRRT-218ENST00000620394 FOXB2Q5VYV0 432 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 HEPN1Q6WQI6 88 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 TRAPPC6BQ86SZ2 158 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 PARP16Q8N5Y8 322 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 CHST4Q8NCG5 386 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 OR5D18Q8NGL1 313 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 NDNFQ8TB73 568 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 PRSS22Q9GZN4 317 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 NEK6Q9HC98 313 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 MYRFQ9Y2G1 1151 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 PCDHGB5Q9Y5G0 923 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 HILPDAQ9Y5L2 63 aa17.68■□□□□ 0.42
SRRT-218ENST00000620394 TRGV10A0A0A0MS01 117 aa17.67■□□□□ 0.42
SRRT-218ENST00000620394 FUOMA2VDF0 154 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms