RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 VAMP3Q15836 100 aa12.41□□□□□ -0.42
SYN2-205ENST00000620175 TRIM61Q5EBN2 209 aa12.41□□□□□ -0.42
SYN2-205ENST00000620175 ERASQ7Z444 233 aa12.41□□□□□ -0.42
SYN2-205ENST00000620175 SPTSSAQ969W0 71 aa12.41□□□□□ -0.42
SYN2-205ENST00000620175 C8orf44Q96CB5 159 aa12.41□□□□□ -0.42
SYN2-205ENST00000620175 FAM234AQ9H0X4 552 aa12.41□□□□□ -0.42
SYN2-205ENST00000620175 NAA60Q9H7X0 242 aa12.41□□□□□ -0.42
SYN2-205ENST00000620175 PITPNC1Q9UKF7 332 aa12.41□□□□□ -0.42
SYN2-205ENST00000620175 UNC80Q8N2C7 3258 aa12.41□□□□□ -0.42
SYN2-205ENST00000620175 LYPD3O95274 346 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 EGR1P18146 543 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 TFPI2P48307 235 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 RTP5Q14D33 572 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 SPINK9Q5DT21 86 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 DOK3Q7L591 496 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 OR5AS1Q8N127 324 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 GTF3AQ92664 365 aaKnown RBP12.4□□□□□ -0.42
SYN2-205ENST00000620175 PLPPR2Q96GM1 343 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 ADAM19Q9H013 955 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 PLEKHF2Q9H8W4 249 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 PILRAQ9UKJ1 303 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 SLC17A4Q9Y2C5 497 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 SEMA4FO95754 770 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 ASAH2BP0C7U1 165 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 DANCRP0C864 163 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 MGST1P10620 155 aaKnown RBP12.4□□□□□ -0.42
SYN2-205ENST00000620175 PMCHP20382 165 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 SRYQ05066 204 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 MYBPHQ13203 477 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 SLC25A26Q70HW3 274 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 POC1AQ8NBT0 407 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 TMEM230Q96A57 120 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 RPP25Q9BUL9 199 aaKnown RBP12.4□□□□□ -0.42
SYN2-205ENST00000620175 ARV1Q9H2C2 271 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 ANXA10Q9UJ72 324 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 TRAPPC1Q9Y5R8 145 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 WNK2Q9Y3S1 2297 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 CD5P06127 495 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 FOXF1Q12946 379 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 PHF19Q5T6S3 580 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 NT5CQ8TCD5 201 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 C8orf33Q9H7E9 229 aaPredicted RBP12.4□□□□□ -0.42
SYN2-205ENST00000620175 TUBA4BQ9H853 241 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 HS3ST3B1Q9Y662 390 aa12.4□□□□□ -0.42
SYN2-205ENST00000620175 FCARP24071 287 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 ZNF574Q6ZN55 896 aaPredicted RBP12.39□□□□□ -0.43
SYN2-205ENST00000620175 ZNF439Q8NDP4 499 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 HLA-CQ95604 372 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 NTNG2Q96CW9 530 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 MFRPQ9BY79 579 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 P4HTMQ9NXG6 502 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 ELOA3CA0A087WX78 387 aaPredicted RBP12.39□□□□□ -0.43
SYN2-205ENST00000620175 IGKV1D-43A0A0B4J1Z2 117 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 F8VVB4 439 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 F8VWA3 439 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 M0R135 149 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 PLPP3O14495 311 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 HNRNPA1P09651 372 aaKnown RBP eCLIP12.39□□□□□ -0.43
SYN2-205ENST00000620175 TMEM50BP56557 158 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 ZNF799Q96GE5 643 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 RNF150Q9ULK6 438 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 TRBV11-1A0A0K0K1C0 115 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 TLCD2A6NGC4 264 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 WNT5AP41221 380 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 SPCS3P61009 180 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 SMAD4Q13485 552 aaKnown RBP12.39□□□□□ -0.43
SYN2-205ENST00000620175 BSXQ3C1V8 233 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 TDHQ8IZJ6 230 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 ARHGEF39Q8N4T4 335 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 RTBDNQ9BSG5 229 aaPredicted RBP12.39□□□□□ -0.43
SYN2-205ENST00000620175 MENTQ9BUN1 341 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 VAMP8Q9BV40 100 aa12.39□□□□□ -0.43
SYN2-205ENST00000620175 SPTBN1Q01082 2364 aaKnown RBP12.39□□□□□ -0.43
SYN2-205ENST00000620175 GRIFINA4D1Z8 144 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 SIAH2O43255 324 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 CRYAAP02489 173 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 ERGP11308 486 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 TMEM241Q24JQ0 296 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 PIGYQ3MUY2 71 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 R4GN57 208 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 RANBP2P49792 3224 aaKnown RBP12.38□□□□□ -0.43
SYN2-205ENST00000620175 MAP1LC3B2A6NCE7 125 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 SERPINE3A8MV23 424 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 GNG10P50151 68 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 HSD17B7P56937 341 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 LILRA6Q6PI73 481 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 HEPN1Q6WQI6 88 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 M1APQ8TC57 530 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 MAP1LC3BQ9GZQ8 125 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 SCN10AQ9Y5Y9 1956 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 ZNF217O75362 1048 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 ZNF737O75373 536 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 IL2RAP01589 272 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 CD1AP06126 327 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 MSX1P28360 303 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 ZNF90Q03938 601 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 WDR5BQ86VZ2 330 aa12.38□□□□□ -0.43
SYN2-205ENST00000620175 PAQR4Q8N4S7 273 aaPredicted RBP12.38□□□□□ -0.43
SYN2-205ENST00000620175 PRSS50Q9UI38 385 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms