RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 NKX2-1P43699 371 aaPredicted RBP12.72□□□□□ -0.37
SYNRG-225ENST00000619541 DYNLT3P51808 116 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 TLE4Q04727 773 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 KISS1Q15726 138 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.72□□□□□ -0.37
SYNRG-225ENST00000619541 RNF133Q8WVZ7 376 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 CCNL2Q96S94 520 aaPredicted RBP12.72□□□□□ -0.37
SYNRG-225ENST00000619541 ZNF665Q9H7R5 613 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 UBE2J1Q9Y385 318 aaPredicted RBP12.72□□□□□ -0.37
SYNRG-225ENST00000619541 PPP5D1E7EU14 171 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 CELA2BP08218 269 aaPredicted RBP12.72□□□□□ -0.37
SYNRG-225ENST00000619541 GNG10P50151 68 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 C1orf61Q13536 156 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 HERPUD1Q15011 391 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 TEX38Q6PEX7 206 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 SLC35E3Q7Z769 313 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 OR13H1Q8NG92 308 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 OR8B12Q8NGG6 310 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 FUT9Q9Y231 359 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 IGSF23A1L1A6 192 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 NKX2-6A6NCS4 301 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 RER1O15258 196 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 CST2P09228 141 aa12.72□□□□□ -0.37
SYNRG-225ENST00000619541 CHD3Q12873 2000 aaKnown RBP12.71□□□□□ -0.37
SYNRG-225ENST00000619541 SHISA8B8ZZ34 492 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 RAB4AP20338 218 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 OR1D4P47884 311 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 CSNK1A1P48729 337 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 MLF1P58340 268 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 PLCXD2Q0VAA5 305 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 WDFY1Q8IWB7 410 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 FBXL14Q8N1E6 418 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 SLC38A9Q8NBW4 561 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 THAP3Q8WTV1 239 aaPredicted RBP12.71□□□□□ -0.37
SYNRG-225ENST00000619541 PGAM5Q96HS1 289 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 OR5B12Q96R08 314 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 PPP1R14DQ9NXH3 145 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 ZNF319Q9P2F9 582 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 TNFSF14O43557 240 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 MT-ATP6P00846 226 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 HSPB1P04792 205 aaKnown RBP12.71□□□□□ -0.37
SYNRG-225ENST00000619541 SLC6A8P48029 635 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 ZNF154Q13106 437 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 IL13RA2Q14627 380 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 SLC22A18ASQ8N1D0 253 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 BEND2Q8NDZ0 799 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 RLN3Q8WXF3 142 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 TMEM18Q96B42 140 aa12.71□□□□□ -0.37
SYNRG-225ENST00000619541 RPUSD4Q96CM3 377 aaKnown RBP12.71□□□□□ -0.37
SYNRG-225ENST00000619541 SEMA4FO95754 770 aa12.71□□□□□ -0.38
SYNRG-225ENST00000619541 IL18BPO95998 194 aa12.71□□□□□ -0.38
SYNRG-225ENST00000619541 ANOS1P23352 680 aa12.71□□□□□ -0.38
SYNRG-225ENST00000619541 HERV-K104P61576 105 aa12.71□□□□□ -0.38
SYNRG-225ENST00000619541 FAM189A2Q15884 450 aa12.71□□□□□ -0.38
SYNRG-225ENST00000619541 ELOVL1Q9BW60 279 aa12.71□□□□□ -0.38
SYNRG-225ENST00000619541 SMDT1Q9H4I9 107 aa12.71□□□□□ -0.38
SYNRG-225ENST00000619541 MMP17Q9ULZ9 603 aa12.71□□□□□ -0.38
SYNRG-225ENST00000619541 IL33O95760 270 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 FAHP16930 419 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 CD33P20138 364 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 EPHA1P21709 976 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 TMEM187Q14656 261 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 IQCJQ1A5X6 159 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 SLC16A14Q7RTX9 510 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 BOD1Q96IK1 185 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 C1orf147Q96MC9 270 aaPredicted RBP12.7□□□□□ -0.38
SYNRG-225ENST00000619541 LIME1Q9H400 295 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 SLC2A9Q9NRM0 540 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 SOHLH2Q9NX45 425 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 ANXA10Q9UJ72 324 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 HMGB3O15347 200 aaKnown RBP12.7□□□□□ -0.38
SYNRG-225ENST00000619541 TCF21O43680 179 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 GNRHRP30968 328 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 WNT5AP41221 380 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 TESK1Q15569 626 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 CXorf66Q5JRM2 361 aaPredicted RBP12.7□□□□□ -0.38
SYNRG-225ENST00000619541 RTL6Q6ICC9 239 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 LIAT1Q6ZQX7 453 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 ZNF695Q8IW36 515 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 CLDND2Q8NHS1 167 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 TMEM171Q8WVE6 324 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 WWTR1Q9GZV5 400 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 CALHM2Q9HA72 323 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 PCNX3Q9H6A9 2034 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 A6NCN8 305 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 DLEU1O43261 78 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 CYB5R3P00387 301 aaPredicted RBP12.7□□□□□ -0.38
SYNRG-225ENST00000619541 IGHV4-34P06331 123 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 OR10J5Q8NHC4 309 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 HOXB13Q92826 284 aaPredicted RBP12.7□□□□□ -0.38
SYNRG-225ENST00000619541 TSLPQ969D9 159 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 PCGF1Q9BSM1 259 aa12.7□□□□□ -0.38
SYNRG-225ENST00000619541 A0A1W2PR80 420 aa12.69□□□□□ -0.38
SYNRG-225ENST00000619541 MSTNO14793 375 aa12.69□□□□□ -0.38
SYNRG-225ENST00000619541 OR3A1P47881 315 aa12.69□□□□□ -0.38
SYNRG-225ENST00000619541 TDGF1P3P51864 188 aa12.69□□□□□ -0.38
SYNRG-225ENST00000619541 CLRN1P58418 232 aa12.69□□□□□ -0.38
SYNRG-225ENST00000619541 ZNF506Q5JVG8 444 aa12.69□□□□□ -0.38
SYNRG-225ENST00000619541 RHBDD1Q8TEB9 315 aa12.69□□□□□ -0.38
SYNRG-225ENST00000619541 SYT3Q9BQG1 590 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms