RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 C7orf34Q96L11 122 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 OR5M11Q96RB7 305 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 INTS14Q96SY0 518 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 FAM206AQ9NX38 181 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 IL20Q9NYY1 176 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 GMPPBQ9Y5P6 360 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 TRGV10A0A0A0MS01 117 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 MAGEA13PA6NCF6 341 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 H0Y980 276 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 H3BUA1 57 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 ZNF593O00488 134 aaPredicted RBP3.52□□□□□ -1.85
SNCA-213ENST00000618500 DHRS3O75911 302 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 SPI1P17947 270 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 VDAC1P21796 283 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 PTGFRP43088 359 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 OR3A1P47881 315 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 ROM1Q03395 351 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 DYNC1I2Q13409 638 aaKnown RBP3.52□□□□□ -1.85
SNCA-213ENST00000618500 PYHIN1Q6K0P9 492 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 TBPL2Q6SJ96 375 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 CD300LDQ6UXZ3 194 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 RASSF6Q6ZTQ3 369 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 KCTD8Q6ZWB6 473 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 Q8N402 240 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 DNAAF1Q8NEP3 725 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 OR2T12Q8NG77 320 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 OR52M1Q8NGK5 317 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 MRGPRDQ8TDS7 321 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 TOMM40LQ969M1 308 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 WDR89Q96FK6 387 aaPredicted RBP3.52□□□□□ -1.85
SNCA-213ENST00000618500 ABHD6Q9BV23 337 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 ELOVL1Q9BW60 279 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 PLSCR3Q9NRY6 295 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 GID8Q9NWU2 228 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 NUFIP1Q9UHK0 495 aaKnown RBP3.52□□□□□ -1.85
SNCA-213ENST00000618500 GLS2Q9UI32 602 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 J3KTA2 159 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 PSMD9O00233 223 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 TOR1AO14656 332 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 NXPH2O95156 264 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 TFF1P04155 84 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 SPARCP09486 303 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 PAX6P26367 422 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 KCNJ3P48549 501 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 POU3F4P49335 361 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 HMGA2P52926 109 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 ZP1P60852 638 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 KRT71Q3SY84 523 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 HAGHLQ6PII5 290 aaPredicted RBP3.52□□□□□ -1.85
SNCA-213ENST00000618500 OVCH2Q7RTZ1 564 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 ANGPTL5Q86XS5 388 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 OR11H1Q8NG94 326 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 OR52L1Q8NGH7 329 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 OR2T10Q8NGZ9 312 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 OTOSQ8NHW6 89 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 DCUN1D4Q92564 292 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 STMN2Q93045 179 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 FLYWCH2Q96CP2 140 aaKnown RBP3.52□□□□□ -1.85
SNCA-213ENST00000618500 CEP19Q96LK0 163 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 PPP1R3EQ9H7J1 279 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 NDUFAF4Q9P032 175 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 TRBV2A0A0J9YWF9 115 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 SHISA3A0PJX4 238 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 TMEM120BA0PK00 339 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 NPIPB11E5RHQ5 1161 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 LY86O95711 162 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 HAND1O96004 215 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 CYB5AP00167 134 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 HLA-DQA2P01906 255 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 HLA-DRB1P01911 266 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 H2BFMP0C1H6 154 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 PYCR1P32322 319 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 MFGE8Q08431 387 aaPredicted RBP3.52□□□□□ -1.85
SNCA-213ENST00000618500 RAB40BQ12829 278 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 LY6G6FQ5SQ64 297 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 CEMP1Q6PRD7 247 aaPredicted RBP3.52□□□□□ -1.85
SNCA-213ENST00000618500 OR4K13Q8NH42 304 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 PIGCQ92535 297 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 ANP32BQ92688 251 aaKnown RBP3.52□□□□□ -1.85
SNCA-213ENST00000618500 KCTD7Q96MP8 289 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 CDRT15Q96T59 188 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 IFT27Q9BW83 186 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 TMEM120AQ9BXJ8 343 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 IL1RAPQ9NPH3 570 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 OR6C3Q9NZP0 311 aa3.52□□□□□ -1.85
SNCA-213ENST00000618500 KLK5Q9Y337 293 aaPredicted RBP3.52□□□□□ -1.85
SNCA-213ENST00000618500 J3QR06 171 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 PRODHO43272 600 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 NDUFB8O95169 186 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 NRASP01111 189 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 IFNGP01579 166 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 HSPB1P04792 205 aaKnown RBP3.51□□□□□ -1.85
SNCA-213ENST00000618500 PRKXP51817 358 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 GNB1P62873 340 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 PITPNAQ00169 270 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 TNFRSF9Q07011 255 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 C17orf58Q2M2W7 97 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 ZNF829Q3KNS6 432 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms