RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 FOXRED2Q8IWF2 684 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 PAQR4Q8N4S7 273 aaPredicted RBP7.2□□□□□ -1.26
GPC6-202ENST00000617456 MS4A15Q8N5U1 240 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 AQP11Q8NBQ7 271 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 OR2T4Q8NH00 348 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 OR51A7Q8NH64 312 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 OR5R1Q8NH85 324 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 OR5K1Q8NHB7 308 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 SLC7A13Q8TCU3 470 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 KLF14Q8TD94 323 aaPredicted RBP7.2□□□□□ -1.26
GPC6-202ENST00000617456 ZNF431Q8TF32 576 aaPredicted RBP7.2□□□□□ -1.26
GPC6-202ENST00000617456 CCL17Q92583 94 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 RAB1CQ92928 201 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 HSH2DQ96JZ2 352 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 C4orf45Q96LM5 186 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 C1orf147Q96MC9 270 aaPredicted RBP7.2□□□□□ -1.26
GPC6-202ENST00000617456 RDH12Q96NR8 316 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 SDHCQ99643 169 aaPredicted RBP7.2□□□□□ -1.26
GPC6-202ENST00000617456 SAP30LQ9HAJ7 183 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 ARMCX1Q9P291 453 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 PSG11Q9UQ72 335 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 SIGLEC7Q9Y286 467 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 LYVE1Q9Y5Y7 322 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 LOC100509620A0A075B734 347 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 IGKV1D-43A0A0B4J1Z2 117 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 A0A1B0GVI7 797 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 AQP12BA6NM10 295 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 C1orf196B1AJZ1 125 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 TEX46H3BTG2 121 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 MYL12BO14950 172 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 ARPC3O15145 178 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 SPRY3O43610 288 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 OR10H3O60404 316 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 ATG12O94817 140 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 ZNF682O95780 498 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 H1F0P07305 194 aaKnown RBP7.19□□□□□ -1.26
GPC6-202ENST00000617456 HTR1AP08908 422 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 HSD17B1P14061 328 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 MYL12AP19105 171 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 TNFRSF1AP19438 455 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 GSTM3P21266 225 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 KITLGP21583 273 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 MDKP21741 143 aaPredicted RBP7.19□□□□□ -1.26
GPC6-202ENST00000617456 CDAP32320 146 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 MAS1LP35410 378 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 RPL4P36578 427 aaKnown RBP7.19□□□□□ -1.26
GPC6-202ENST00000617456 IFNGR2P38484 337 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 NAA10P41227 235 aaPredicted RBP7.19□□□□□ -1.26
GPC6-202ENST00000617456 IL5RAQ01344 420 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 DHODHQ02127 395 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 SRSF4Q08170 494 aaKnown RBP7.19□□□□□ -1.26
GPC6-202ENST00000617456 HNRNPA0Q13151 305 aaKnown RBP7.19□□□□□ -1.26
GPC6-202ENST00000617456 CDK5R2Q13319 367 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 GUK1Q16774 197 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 GLYATQ6IB77 296 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 HAGHLQ6PII5 290 aaPredicted RBP7.19□□□□□ -1.26
GPC6-202ENST00000617456 DNM1P34Q6PK57 102 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 GLB1L2Q8IW92 636 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 LINC00471Q8N535 108 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 HSD17B11Q8NBQ5 300 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 OR5L1Q8NGL2 311 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 FAM162AQ96A26 154 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 SLC25A28Q96A46 364 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 MALSU1Q96EH3 234 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 MRPS24Q96EL2 167 aaKnown RBP7.19□□□□□ -1.26
GPC6-202ENST00000617456 GPA33Q99795 319 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 NIPSNAP1Q9BPW8 284 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 COMMD4Q9H0A8 199 aa7.19□□□□□ -1.26
GPC6-202ENST00000617456 FAM212BQ9NTI7 297 aaPredicted RBP7.19□□□□□ -1.26
GPC6-202ENST00000617456 IGHV3OR16-10A0A075B7F0 116 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 TRAV27A0A087WT01 109 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 TMEM218A2RU14 115 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 J3KTA2 159 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 CDC42EP2O14613 210 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 XPNPEP2O43895 674 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 KHDRBS3O75525 346 aaKnown RBP7.18□□□□□ -1.26
GPC6-202ENST00000617456 GPANK1O95872 356 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 RNASE1P07998 156 aaKnown RBP7.18□□□□□ -1.26
GPC6-202ENST00000617456 NMBP08949 121 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 NPSP0C0P6 89 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 RCC1P18754 421 aaPredicted RBP7.18□□□□□ -1.26
GPC6-202ENST00000617456 TNFSF4P23510 183 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 CRHBPP24387 322 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 NUDT2P50583 147 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 GP2P55259 537 aaKnown RBP7.18□□□□□ -1.26
GPC6-202ENST00000617456 PPP1CBP62140 327 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 FMODQ06828 376 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 ENDOGQ14249 297 aaKnown RBP7.18□□□□□ -1.26
GPC6-202ENST00000617456 IRF3Q14653 427 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 SLC9A3R2Q15599 337 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 MTX3Q5HYI7 312 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 KLF17Q5JT82 389 aaPredicted RBP7.18□□□□□ -1.26
GPC6-202ENST00000617456 SPANXN2Q5MJ10 180 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 SAMD4BQ5PRF9 694 aaKnown RBP7.18□□□□□ -1.26
GPC6-202ENST00000617456 LEMD1Q68G75 181 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 TCF24Q7RTU0 167 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 TSEN54Q7Z6J9 526 aaKnown RBP7.18□□□□□ -1.26
GPC6-202ENST00000617456 THAP5Q7Z6K1 395 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 NAA40Q86UY6 237 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 ZNF101Q8IZC7 436 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms