RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 NKX6-2Q9C056 277 aaPredicted RBP12.56□□□□□ -0.4
PRKD1-209ENST00000616995 UFSP2Q9NUQ7 469 aa12.56□□□□□ -0.4
PRKD1-209ENST00000616995 ZNF716A6NP11 495 aa12.56□□□□□ -0.4
PRKD1-209ENST00000616995 ANKRD30BLA7E2S9 258 aa12.56□□□□□ -0.4
PRKD1-209ENST00000616995 TSPAN15O95858 294 aa12.56□□□□□ -0.4
PRKD1-209ENST00000616995 TMEM33P57088 247 aa12.56□□□□□ -0.4
PRKD1-209ENST00000616995 SLC10A1Q14973 349 aa12.56□□□□□ -0.4
PRKD1-209ENST00000616995 IZUMO4Q1ZYL8 232 aa12.56□□□□□ -0.4
PRKD1-209ENST00000616995 EIF5AL1Q6IS14 154 aaKnown RBP12.56□□□□□ -0.4
PRKD1-209ENST00000616995 LYPD6Q86Y78 171 aa12.56□□□□□ -0.4
PRKD1-209ENST00000616995 SPAG16Q8N0X2 631 aa12.56□□□□□ -0.4
PRKD1-209ENST00000616995 HS3ST6Q96QI5 342 aa12.56□□□□□ -0.4
PRKD1-209ENST00000616995 FOXD3Q9UJU5 478 aaPredicted RBP12.56□□□□□ -0.4
PRKD1-209ENST00000616995 APC2O95996 2303 aa12.56□□□□□ -0.4
PRKD1-209ENST00000616995 SYNGR1O43759 233 aa12.55□□□□□ -0.4
PRKD1-209ENST00000616995 SNAPC5O75971 98 aa12.55□□□□□ -0.4
PRKD1-209ENST00000616995 GP1BAP07359 652 aa12.55□□□□□ -0.4
PRKD1-209ENST00000616995 HOXD4P09016 255 aaPredicted RBP12.55□□□□□ -0.4
PRKD1-209ENST00000616995 PVALBP20472 110 aaPredicted RBP12.55□□□□□ -0.4
PRKD1-209ENST00000616995 PRSS54Q6PEW0 395 aa12.55□□□□□ -0.4
PRKD1-209ENST00000616995 NUFIP2Q7Z417 695 aaKnown RBP12.55□□□□□ -0.4
PRKD1-209ENST00000616995 SLC2A9Q9NRM0 540 aa12.55□□□□□ -0.4
PRKD1-209ENST00000616995 DOCK11Q5JSL3 2073 aa12.55□□□□□ -0.4
PRKD1-209ENST00000616995 SCTP09683 121 aa12.55□□□□□ -0.4
PRKD1-209ENST00000616995 FUT3P21217 361 aa12.55□□□□□ -0.4
PRKD1-209ENST00000616995 C2CD4CQ8TF44 421 aa12.55□□□□□ -0.4
PRKD1-209ENST00000616995 SF3B5Q9BWJ5 86 aaKnown RBP12.55□□□□□ -0.4
PRKD1-209ENST00000616995 ZNF175Q9Y473 711 aa12.55□□□□□ -0.4
PRKD1-209ENST00000616995 ABCD4O14678 606 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 IL2RAP01589 272 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 FHITP49789 147 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 UBE2NP61088 152 aaKnown RBP12.54□□□□□ -0.4
PRKD1-209ENST00000616995 TLE1Q04724 770 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 KCNMB1Q16558 191 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 FAM213BQ8TBF2 198 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 ZNF107Q9UII5 783 aaPredicted RBP12.54□□□□□ -0.4
PRKD1-209ENST00000616995 RCL1Q9Y2P8 373 aaKnown RBP12.54□□□□□ -0.4
PRKD1-209ENST00000616995 V9GYS6 101 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 GTF3C1Q12789 2109 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 TMEM265A0A087WTH1 108 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 SSSCA1O60232 199 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 PDCD6O75340 191 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 DKK1O94907 266 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 SLC25A4P12235 298 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 CALCRP30988 508 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 NHLH2Q02577 135 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 PRRX2Q99811 253 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 OSGIN2Q9Y236 505 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 H7C2Y5 167 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 SNRNP70P08621 437 aaKnown RBP12.54□□□□□ -0.4
PRKD1-209ENST00000616995 NAT2P11245 290 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 B3GALT5-AS1P59052 145 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 RPS16P62249 146 aaKnown RBP12.54□□□□□ -0.4
PRKD1-209ENST00000616995 TAGLNQ01995 201 aaKnown RBP12.54□□□□□ -0.4
PRKD1-209ENST00000616995 NSUN5P2Q63ZY6 315 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 ZDHHC23Q8IYP9 409 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 ZC3H10Q96K80 434 aaKnown RBP12.54□□□□□ -0.4
PRKD1-209ENST00000616995 PIGMQ9H3S5 423 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 LIME1Q9H400 295 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 ZNF552Q9H707 407 aaPredicted RBP12.54□□□□□ -0.4
PRKD1-209ENST00000616995 PCDHB16Q9NRJ7 776 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 CRIM1Q9NZV1 1036 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 RNF150Q9ULK6 438 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 LHX6Q9UPM6 363 aa12.54□□□□□ -0.4
PRKD1-209ENST00000616995 FIGNL2A6NMB9 653 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 EIF3GO75821 320 aaKnown RBP eCLIP12.53□□□□□ -0.4
PRKD1-209ENST00000616995 SLC34A2O95436 690 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 POLR2GP62487 172 aaKnown RBP eCLIP12.53□□□□□ -0.4
PRKD1-209ENST00000616995 FAHD2BQ6P2I3 314 aaPredicted RBP12.53□□□□□ -0.4
PRKD1-209ENST00000616995 OR52M1Q8NGK5 317 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 FAHD2AQ96GK7 314 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 NMES1Q9C002 83 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 PPP1R3CQ9UQK1 317 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 FBXO7Q9Y3I1 522 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 LIPGQ9Y5X9 500 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 FAM24AA6NFZ4 105 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 ETV2O00321 342 aaPredicted RBP12.53□□□□□ -0.4
PRKD1-209ENST00000616995 ACTL6AO96019 429 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 FGF2P09038 288 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 CD46P15529 392 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 NFYBP25208 207 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 EIF5AP63241 154 aaKnown RBP12.53□□□□□ -0.4
PRKD1-209ENST00000616995 HOXA4Q00056 320 aaPredicted RBP12.53□□□□□ -0.4
PRKD1-209ENST00000616995 ALKBH6Q3KRA9 238 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 TMEM182Q6ZP80 229 aaPredicted RBP12.53□□□□□ -0.4
PRKD1-209ENST00000616995 HSD17B13Q7Z5P4 300 aaPredicted RBP12.53□□□□□ -0.4
PRKD1-209ENST00000616995 BSCL2Q96G97 398 aaPredicted RBP12.53□□□□□ -0.4
PRKD1-209ENST00000616995 OR6C65A6NJZ3 312 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 WDR1O75083 606 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 SRSF6Q13247 344 aaKnown RBP12.53□□□□□ -0.4
PRKD1-209ENST00000616995 ZNF529Q6P280 563 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 RHOFQ9HBH0 211 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 OBP2BQ9NPH6 170 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 RFNGQ9Y644 331 aa12.53□□□□□ -0.4
PRKD1-209ENST00000616995 TUBAL3A6NHL2 446 aa12.52□□□□□ -0.4
PRKD1-209ENST00000616995 NEURL1O76050 574 aa12.52□□□□□ -0.4
PRKD1-209ENST00000616995 CCL1P22362 96 aa12.52□□□□□ -0.4
PRKD1-209ENST00000616995 HOXC12P31275 282 aa12.52□□□□□ -0.4
PRKD1-209ENST00000616995 ERGIC1Q969X5 290 aa12.52□□□□□ -0.4
PRKD1-209ENST00000616995 CNTNAP3Q9BZ76 1288 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms