RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 OR7C2O60412 319 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 SLC25A26Q70HW3 274 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 TSPAN32Q96QS1 320 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 MED12Q93074 2177 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 DOCK11Q5JSL3 2073 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 J3QR89 54 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 HLA-DRB5Q30154 266 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 ANAPC16Q96DE5 110 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 ZPBPQ9BS86 351 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 SLC46A2Q9BY10 475 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 ZNF331Q9NQX6 463 aaPredicted RBP11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 UNC13CQ8NB66 2214 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 NXPH2O95156 264 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 CTSDP07339 412 aaPredicted RBP11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 GALNSP34059 522 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 DAP3P51398 398 aaKnown RBP11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 FMODQ06828 376 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 GGTLC2Q14390 218 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 MRGPRGQ86SM5 289 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 NIT1Q86X76 327 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 GBGT1Q8N5D6 347 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 OR52M1Q8NGK5 317 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 SP7Q8TDD2 431 aaPredicted RBP11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 MEGF9Q9H1U4 602 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 DNAJB12Q9NXW2 375 aaKnown RBP11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 PLEK2Q9NYT0 353 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 PSENENQ9NZ42 101 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 MCTS1Q9ULC4 181 aaKnown RBP11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 GAGE10A6NGK3 116 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 LRRC3CA6NJW4 275 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 CTLA4P16410 223 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 DLX2Q07687 328 aaPredicted RBP11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 MGAT2Q10469 447 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 MRPL58Q14197 206 aaKnown RBP11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 EMC4Q5J8M3 183 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 DNLZQ5SXM8 178 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 TMEM234Q8WY98 164 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 MOB3AQ96BX8 217 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 MENTQ9BUN1 341 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 MMP25Q9NPA2 562 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 MED29Q9NX70 200 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 B3GAT1Q9P2W7 334 aa11.95□□□□□ -0.5
PPP4R3B-205ENST00000616288 TRAV36DV7A0A075B6V5 113 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 SNURFLB1AK76 121 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 GNG7O60262 68 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 CRYAAP02489 173 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 BRS3P32247 399 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 RUNX2Q13950 521 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 GABRA6Q16445 453 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 ZNF808Q8N4W9 903 aaPredicted RBP11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 AQP3Q92482 292 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 SLC46A1Q96NT5 459 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 ZNF385AQ96PM9 386 aaKnown RBP11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 SERPINE3A8MV23 424 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 H0YGG7 62 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 GDF9O60383 454 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 NRASP01111 189 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 KRASP01116 189 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 CCR2P41597 374 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 LIAT1Q6ZQX7 453 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 CISD2Q8N5K1 135 aaKnown RBP11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 TMEM252Q8N6L7 170 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 SUCLG1P53597 346 aaKnown RBP11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 CDKN3Q16667 212 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 NEIL1Q96FI4 390 aaPredicted RBP11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 HDHD3Q9BSH5 251 aaPredicted RBP11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 RBM24Q9BX46 236 aaKnown RBP11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 KLRF1Q9NZS2 232 aa11.94□□□□□ -0.5
PPP4R3B-205ENST00000616288 EDDM13A0A1B0GTR0 161 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 NGFRP08138 427 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 ZNF157P51786 506 aaPredicted RBP11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 SP3Q02447 781 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 TCTN1Q2MV58 587 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 C9orf131Q5VYM1 1079 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 RNASEKQ6P5S7 137 aaKnown RBP11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 NPSR1Q6W5P4 371 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 KIF26BQ2KJY2 2108 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 PRR32B1ATL7 298 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 PAGE4O60829 102 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 GCH1P30793 250 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 HOXA6P31267 233 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 DUSP3P51452 185 aaPredicted RBP11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 ZNF133P52736 654 aaPredicted RBP11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 TCL1AP56279 114 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 GAGE1Q13065 139 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 PRTGQ2VWP7 1150 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 ZNF506Q5JVG8 444 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 D2HGDHQ8N465 521 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 HINT2Q9BX68 163 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 VN1R3Q9BXE9 311 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 TMEM106BQ9NUM4 274 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 POLR3KQ9Y2Y1 108 aaPredicted RBP11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 SLC6A8P48029 635 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 ICAM4Q14773 271 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 RTL10Q7L3V2 364 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 H1FOOQ8IZA3 346 aaPredicted RBP11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 MRPS2Q9Y399 296 aaKnown RBP11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 OR51B4Q9Y5P0 310 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 CABIN1Q9Y6J0 2220 aa11.93□□□□□ -0.5
PPP4R3B-205ENST00000616288 SMPD2O60906 423 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms