RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 RBM24Q9BX46 236 aaKnown RBP11.5□□□□□ -0.57
MSH6-214ENST00000616033 CUTCQ9NTM9 273 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 UBE2J1Q9Y385 318 aaPredicted RBP11.5□□□□□ -0.57
MSH6-214ENST00000616033 PTPRSQ13332 1948 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 FREM2Q5SZK8 3169 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 KNTC1P50748 2209 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 NKX2-6A6NCS4 301 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 SCGB1D1O95968 90 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 SEC11BP0C7V7 166 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 EFNA3P52797 238 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 EWSR1Q01844 656 aaKnown RBP eCLIP11.5□□□□□ -0.575e-7■■■■□ 21.4
MSH6-214ENST00000616033 HYAL1Q12794 435 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 OR5I1Q13606 314 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 ERASQ7Z444 233 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 UEVLDQ8IX04 471 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 ZNF721Q8TF20 911 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 TUBG2Q9NRH3 451 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 LRFN1Q9P244 771 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 CCDC187A0A096LP49 1063 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 FRG2CA6NGY1 282 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 VSTM2BA6NLU5 285 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 ALG1L2C9J202 215 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 GPR137BO60478 399 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 DDAH2O95865 285 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 GAPDHP04406 335 aaKnown RBP11.5□□□□□ -0.57
MSH6-214ENST00000616033 GNRHRP30968 328 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 CXorf66Q5JRM2 361 aaPredicted RBP11.5□□□□□ -0.57
MSH6-214ENST00000616033 DTX1Q86Y01 620 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 SLC35G3Q8N808 338 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 SLC38A9Q8NBW4 561 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 PLPP5Q8NEB5 264 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 GPBAR1Q8TDU6 330 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 NAT6Q93015 286 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 MVB12AQ96EY5 273 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 ZNF705FA8MVS1 300 aaPredicted RBP11.49□□□□□ -0.57
MSH6-214ENST00000616033 SEC14L6B5MCN3 397 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 OR2J2O76002 312 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 PATE4P0C8F1 98 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 ZNF705DP0CH99 300 aaPredicted RBP11.49□□□□□ -0.57
MSH6-214ENST00000616033 ZNF705BP0CI00 300 aaPredicted RBP11.49□□□□□ -0.57
MSH6-214ENST00000616033 LYL1P12980 280 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 ZNF17P17021 662 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 RAB1AP62820 205 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 SCRT1Q9BWW7 348 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 C5orf67F2Z3F1 127 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 FUT3P21217 361 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 MPZP25189 248 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 ZNF154Q13106 437 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 MYBPHQ13203 477 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 FZD2Q14332 565 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 PIGYQ3MUY2 71 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 PRAMEF20Q5VT98 475 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 SYT13Q7L8C5 426 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 LGI3Q8N145 548 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 CPEB3Q8NE35 698 aaKnown RBP11.49□□□□□ -0.57
MSH6-214ENST00000616033 OR14L1PQ8NHC6 308 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 ABHD5Q8WTS1 349 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 CCNL2Q96S94 520 aaPredicted RBP11.49□□□□□ -0.57
MSH6-214ENST00000616033 C2orf88Q9BSF0 95 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 SLC2A9Q9NRM0 540 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 ANXA10Q9UJ72 324 aa11.49□□□□□ -0.57
MSH6-214ENST00000616033 G3V3Y1 287 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 SEMA4FO95754 770 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 UCP3P55916 312 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 HERV-K104P61576 105 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 RPS18P62269 152 aaKnown RBP11.48□□□□□ -0.57
MSH6-214ENST00000616033 HSD11B2P80365 405 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 CMTM1Q8IZ96 169 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 HIST3H2BBQ8N257 126 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 TMEM234Q8WY98 164 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 SLC39A7Q92504 469 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 ZNF442Q9H7R0 627 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 PRSS47A8MTI9 375 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 ZNF814B7Z6K7 855 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 CSNK1A1P48729 337 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 ARSJQ5FYB0 599 aaPredicted RBP11.48□□□□□ -0.57
MSH6-214ENST00000616033 NEK7Q8TDX7 302 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 TVP23CQ96ET8 276 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 KIR2DS5A0A0G2JLQ3 304 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 A0A0G2JNG1 304 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 CRYM-AS1A6NIL9 109 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 KIR2DS3K7RE56 304 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 ZNF43P17038 809 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 DUSP1P28562 367 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 DYNLT3P51808 116 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 CLDN17P56750 224 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 KIR2DS5Q14953 304 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 MRPL41Q8IXM3 137 aaKnown RBP11.48□□□□□ -0.57
MSH6-214ENST00000616033 ARHGEF39Q8N4T4 335 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 OR2C3Q8N628 320 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 TMEM37Q8WXS4 190 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 NAA60Q9H7X0 242 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 PLEK2Q9NYT0 353 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 PLA2G3Q9NZ20 509 aa11.48□□□□□ -0.57
MSH6-214ENST00000616033 BMP5P22003 454 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 ERVS71-1P61550 626 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 ADIRFQ15847 76 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 Q5PR19 223 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 S100A7AQ86SG5 101 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms