RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 OR52I2Q8NH67 350 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 TIMM8BQ9Y5J9 83 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 A0A1W2PS18 150 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 PRDX2P32119 198 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 ACAA2P42765 397 aaKnown RBP8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR3A1P47881 315 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 CALHM1Q8IU99 346 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 FAM168AQ92567 244 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 CLEC18AA5D8T8 446 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 OGG1O15527 345 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 ZNF708P17019 499 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 GP2P55259 537 aaKnown RBP8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 TMEM128Q5BJH2 165 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 CLEC18CQ8NCF0 446 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 SLC26A10Q8NG04 563 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 K7N7A8 449 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 SNCGO76070 127 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 RPS19P39019 145 aaKnown RBP8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 FABP5Q01469 135 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 CCDC71Q8IV32 467 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR2G3Q8NGZ4 309 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 FAM213BQ8TBF2 198 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 C20orf202A1L168 122 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 CTDSP2O14595 271 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 SSSCA1O60232 199 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 ACSM4P0C7M7 580 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 CD80P33681 288 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 PMELP40967 661 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 CNN1P51911 297 aaKnown RBP8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR2B11Q5JQS5 317 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 SLC7A6Q92536 515 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 GDF9O60383 454 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 CELA2AP08217 269 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 RAB4AP20338 218 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 AKR1C3P42330 323 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 CLDN20P56880 219 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 TMEM217Q8N7C4 229 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 WDR61Q9GZS3 305 aaKnown RBP8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 AUNIPQ9H7T9 357 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 NTN4Q9HB63 628 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 CBLN4Q9NTU7 201 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 IGKV3D-11A0A0A0MRZ8 115 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 DUXBA0A1W2PPF3 345 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 SMLR1H3BR10 107 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 CORTO00230 105 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 SS18L1O75177 396 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 GZMKP49863 264 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 MMP16P51512 607 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 RPL31P62899 125 aaKnown RBP8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 COL10A1Q03692 680 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 HYAL4Q2M3T9 481 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 C10orf128Q5T292 105 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 UBE2FQ969M7 185 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 PTX4Q96A99 478 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 DERL3Q96Q80 235 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 PCGF1Q9BSM1 259 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 SLC45A2Q9UMX9 530 aa8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 LSM2Q9Y333 95 aaKnown RBP8.51□□□□□ -1.05
TNFRSF9-204ENST00000615230 A8MV72 311 aaPredicted RBP8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 KRASP01116 189 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 FGF7P21781 194 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 CLINT1Q14677 625 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 LAMTOR1Q6IAA8 161 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 FAM90A1Q86YD7 464 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 Q8WTZ3 238 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 TAF9BQ9HBM6 251 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 ING1Q9UK53 422 aaPredicted RBP8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 KLK13Q9UKR3 277 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 C3orf85A0A1B0GTC6 90 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 RAB29O14966 203 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 TNFSF12O43508 249 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 IGKV3-11P04433 115 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 MGST1P10620 155 aaKnown RBP8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 DCAF12L2Q5VW00 463 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 LYSMD2Q8IV50 215 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 NUP37Q8NFH4 326 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 CTHRC1Q96CG8 243 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 YIPF6Q96EC8 236 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR2V2Q96R30 315 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 MIA3Q5JRA6 1907 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 C9orf172C9J069 976 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 CDIPTO14735 213 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 IGKV1D-16P01601 117 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 SLC25A53Q5H9E4 307 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 AADACL4Q5VUY2 407 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 IMMP1LQ96LU5 166 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR2J1Q9GZK6 312 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 SLC25A6P12236 298 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 S100A11P31949 105 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 PSG4Q00888 419 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 ACSF3Q4G176 576 aaPredicted RBP8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 ATP1A1-AS1Q5TC04 95 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 FADS6Q8N9I5 356 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 SMIM4Q8WVI0 70 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 NUDCD2Q8WVJ2 157 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 SPACA5Q96QH8 159 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 A0A0B4J2A0 478 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 A0A1B0GV50 99 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 GLRXP35754 106 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 PDZK1IP1Q13113 114 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms