RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 FCER2P06734 321 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 CSF1P09603 554 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 GLRA1P23415 457 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 BTG1P62324 171 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 HOXA4Q00056 320 aaPredicted RBP11.6□□□□□ -0.55
TMEM254-213ENST00000613758 PDCD1Q15116 288 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 BOLLQ8N9W6 283 aaKnown RBP11.6□□□□□ -0.55
TMEM254-213ENST00000613758 OR4C16Q8NGL9 310 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 OR11L1Q8NGX0 322 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 DEDD2Q8WXF8 326 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 RAB3CQ96E17 227 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 WDR13Q9H1Z4 485 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 HES4Q9HCC6 221 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 ZNF581Q9P0T4 197 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 RNF7Q9UBF6 113 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 NUBP2Q9Y5Y2 271 aa11.6□□□□□ -0.55
TMEM254-213ENST00000613758 ARFGEF3Q5TH69 2177 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 CHD3Q12873 2000 aaKnown RBP11.59□□□□□ -0.55
TMEM254-213ENST00000613758 SRRM5B3KS81 715 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 BOLA2-SMG1P6H3BVE0 249 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 MFNGO00587 321 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 SSX5O60225 188 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 LHBP01229 141 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 HIST1H1DP16402 221 aaKnown RBP11.59□□□□□ -0.55
TMEM254-213ENST00000613758 DUSP1P28562 367 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 TATDN3Q17R31 274 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 ACP7Q6ZNF0 438 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 BTN2A1Q7KYR7 527 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 GCSAMQ8N6F7 178 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 TMEM229BQ8NBD8 167 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 OR4D10Q8NGI6 311 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 NUDCD2Q8WVJ2 157 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 ARHGAP5-AS1Q96IT6 56 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 RAB1BQ9H0U4 201 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 PLEKHF2Q9H8W4 249 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 RASL12Q9NYN1 266 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 COPZ2Q9P299 210 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 ALG5Q9Y673 324 aa11.59□□□□□ -0.55
TMEM254-213ENST00000613758 CACNA1DQ01668 2161 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 TRAV6A0A075B6T7 132 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A10PA6NDY2 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A18PA6NE21 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A16PA6NEW6 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A20PA6NIJ5 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A8PA6NJQ4 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A7PA6NKC0 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A22PA8MWA6 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A12PA8MX19 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A5PA8MXJ8 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A23PA8MXZ1 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 HPXP02790 462 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 CD3DP04234 171 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 GSTP1P09211 210 aaKnown RBP11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A15PP0C7V4 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A13PP0C7W8 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A14PP0C7W9 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 FAM90A24PP0C7X0 464 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 IRF2P14316 349 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 EGR1P18146 543 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 COL8A1P27658 744 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 ACTBP60709 375 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 ACTG1P63261 375 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 SIGIRRQ6IA17 410 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 TGIF2LYQ8IUE0 185 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.58□□□□□ -0.56
TMEM254-213ENST00000613758 NUDT15Q9NV35 164 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 LRRC30A6NM36 301 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 OR7C1O76099 320 aaPredicted RBP11.58□□□□□ -0.56
TMEM254-213ENST00000613758 CYB5R3P00387 301 aaPredicted RBP11.58□□□□□ -0.56
TMEM254-213ENST00000613758 HNRNPCP07910 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
TMEM254-213ENST00000613758 AKAIN1P0CW23 69 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 RAB25P57735 213 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 IL13RA2Q14627 380 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 NKAPLQ5M9Q1 402 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 TRAPPC6BQ86SZ2 158 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 HPS1Q92902 700 aa11.58□□□□□ -0.56
TMEM254-213ENST00000613758 LRRK2Q5S007 2527 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 HLA-DMAP28067 261 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 IKZF1Q13422 519 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 ZNF146Q15072 292 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 MPV17LQ2QL34 196 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 SMIM21Q3B7S5 101 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 STEAP1BQ6NZ63 245 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 FIP1L1Q6UN15 594 aaKnown RBP11.57□□□□□ -0.56
TMEM254-213ENST00000613758 C6orf201Q7Z4U5 140 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 LINC00596Q86U02 117 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 ZNF295-AS1Q8N0V1 137 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 GVQW1Q8N7I0 195 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 CCL17Q92583 94 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 PECRQ9BY49 303 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 PLEKHJ1Q9NW61 149 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 MCUBQ9NWR8 336 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 DCAF16Q9NXF7 216 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 ZNF107Q9UII5 783 aaPredicted RBP11.57□□□□□ -0.56
TMEM254-213ENST00000613758 ANAPC10Q9UM13 185 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 NPTNQ9Y639 398 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 IGHV1-69-2A0A0G2JMI3 117 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.57□□□□□ -0.56
TMEM254-213ENST00000613758 DEGS1O15121 323 aa11.57□□□□□ -0.56
TMEM254-213ENST00000613758 KNG1P01042 644 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms