RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 CHAF1BQ13112 559 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 CLINT1Q14677 625 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 ICAM4Q14773 271 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 EXT1Q16394 746 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 CXorf66Q5JRM2 361 aaPredicted RBP6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 FAM27BQ5VT28 67 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 SLC22A25Q6T423 547 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 SPNS3Q6ZMD2 512 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 RABEPKQ7Z6M1 372 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 SLC22A8Q8TCC7 542 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 TCEAL3Q969E4 200 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 SUCNR1Q9BXA5 334 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 HIPK2Q9H2X6 1198 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 ELL3Q9HB65 397 aaPredicted RBP6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 P4HTMQ9NXG6 502 aa6.42□□□□□ -1.38
PPARGC1A-217ENST00000613098 FAM230AA0A1W2PPH8 454 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 ZNF850A8MQ14 1090 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 RPL36A-HNRNPH2H7BZ11 118 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 ZNF14P17017 642 aaPredicted RBP6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 NPBWR2P48146 333 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 GFI1BQ5VTD9 330 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 RTL6Q6ICC9 239 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 ZNF774Q6NX45 483 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 MRPL14Q6P1L8 145 aaKnown RBP6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 CADM4Q8NFZ8 388 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 JSRP1Q96MG2 331 aaPredicted RBP6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 OR6C1Q96RD1 312 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 PRDM13Q9H4Q3 707 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 WNT16Q9UBV4 365 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 TCFL5Q9UL49 500 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 RNF115Q9Y4L5 304 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 IGKV1D-13A0A0B4J2D9 117 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 IGKV1-6A0A0C4DH72 117 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 A0A0J9YW62 118 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 CLEC18AA5D8T8 446 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 OR6C6A6NF89 314 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 H3BQ15 152 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 IGKV1-13P0DP09 117 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 CCL3P10147 92 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 DUSP1P28562 367 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 RAB5CP51148 216 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 PCOLCEQ15113 449 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 FBXW12Q6X9E4 464 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 CLEC18CQ8NCF0 446 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 FAM213BQ8TBF2 198 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 RAB39BQ96DA2 213 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 TMEM56Q96MV1 263 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 METTL9Q9H1A3 318 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 CALHM2Q9HA72 323 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 STRAPQ9Y3F4 350 aaKnown RBP6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 TMEM56-RWDD3S4R434 201 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 NCKAP5O14513 1909 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 CEP192Q8TEP8 1941 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 KIAA1549Q9HCM3 1950 aa6.41□□□□□ -1.38
PPARGC1A-217ENST00000613098 hCG_38984A0A1B0GV85 526 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 RBFOX3A6NFN3 312 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 TRDCB7Z8K6 153 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 MPPED1O15442 326 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 ST8SIA3O43173 380 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 ZFAND5O76080 213 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 S100A6P06703 90 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 B3GALT5-AS1P59052 145 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 ZNF92Q03936 586 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 NMSQ5H8A3 153 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 SELENOHQ8IZQ5 122 aaKnown RBP6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 BATF2Q8N1L9 274 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 OR2C3Q8N628 320 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 TMEM252Q8N6L7 170 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 ZFP62Q8NB50 900 aaPredicted RBP6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 Q8NFD4 153 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 MAFAQ8NHW3 353 aaPredicted RBP6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 CD300LFQ8TDQ1 290 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 SPSB1Q96BD6 273 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 RBM24Q9BX46 236 aaKnown RBP6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 TMEM222Q9H0R3 208 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 PLEK2Q9NYT0 353 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 DOK5Q9P104 306 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 MMP24Q9Y5R2 645 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 PUS1Q9Y606 427 aaKnown RBP eCLIP6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 SPAG17Q6Q759 2223 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 A0A0G2JRQ6 117 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 C3orf85A0A1B0GTC6 90 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 C3orf80F5H4A9 247 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 PHF1O43189 567 aaPredicted RBP6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 ZNHIT1O43257 154 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 HIST1H2BKO60814 126 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 OR2C1O95371 312 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 PPYP01298 95 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 HIST1H2BJP06899 126 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 SOD3P08294 240 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 RD3LP0DJH9 198 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 EDN3P14138 238 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 HIST1H2BOP23527 126 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 HIST1H2BBP33778 126 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 CLDN15P56746 228 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 HIST1H2BDP58876 126 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 HIST1H2BCP62807 126 aa6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 MRPS34P82930 218 aaKnown RBP6.4□□□□□ -1.38
PPARGC1A-217ENST00000613098 RUNX1Q01196 453 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms