RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 ZNF205O95201 554 aa24■■□□□ 1.43
CSPG5-205ENST00000610462 CELA3BP08861 270 aa24■■□□□ 1.43
CSPG5-205ENST00000610462 GLP1RP43220 463 aa24■■□□□ 1.43
CSPG5-205ENST00000610462 PIGPP57054 158 aa24■■□□□ 1.43
CSPG5-205ENST00000610462 IL15RAQ13261 267 aa24■■□□□ 1.43
CSPG5-205ENST00000610462 SRSF7Q16629 238 aaKnown RBP eCLIP24■■□□□ 1.43
CSPG5-205ENST00000610462 FBXW12Q6X9E4 464 aa24■■□□□ 1.43
CSPG5-205ENST00000610462 PLK3Q9H4B4 646 aa24■■□□□ 1.43
CSPG5-205ENST00000610462 KCNMB2Q9Y691 235 aa24■■□□□ 1.43
CSPG5-205ENST00000610462 LYZL6O75951 148 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 M6PRP20645 277 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 LUMP51884 338 aaPredicted RBP23.99■■□□□ 1.43
CSPG5-205ENST00000610462 UCP3P55916 312 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 FXYD4P59646 89 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 GABRA6Q16445 453 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 SPATA46Q5T0L3 261 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 PRSS54Q6PEW0 395 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 MOB3AQ96BX8 217 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 ARPC5LQ9BPX5 153 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 ZNF471Q9BX82 626 aaPredicted RBP23.99■■□□□ 1.43
CSPG5-205ENST00000610462 IL36RNQ9UBH0 155 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 CNOT4O95628 575 aaKnown RBP23.99■■□□□ 1.43
CSPG5-205ENST00000610462 CEACAM1P13688 526 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 RBM39Q14498 530 aaKnown RBP23.99■■□□□ 1.43
CSPG5-205ENST00000610462 ABCA11PQ4W5N1 156 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 LINC00596Q86U02 117 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 CDH20Q9HBT6 801 aa23.99■■□□□ 1.43
CSPG5-205ENST00000610462 A0A1W2PR80 420 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 SMPD2O60906 423 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 CA6P23280 308 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 IL24Q13007 206 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 PDZD9Q8IXQ8 264 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 CCDC120Q96HB5 630 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 REG4Q9BYZ8 158 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 PKIBQ9C010 78 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 SLC25A32Q9H2D1 315 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 PLSCR2Q9NRY7 297 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 KCNIP3Q9Y2W7 256 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 MEMO1Q9Y316 297 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 ESPL1Q14674 2120 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 NAPSAO96009 420 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 PRKACAP17612 351 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 IDH3GP51553 393 aaPredicted RBP23.98■■□□□ 1.43
CSPG5-205ENST00000610462 INO80CQ6PI98 192 aaPredicted RBP23.98■■□□□ 1.43
CSPG5-205ENST00000610462 C9orf106Q8NAJ2 232 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 WNT2BQ93097 391 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 NAA60Q9H7X0 242 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 Q9N2K0 584 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 LHX6Q9UPM6 363 aa23.98■■□□□ 1.43
CSPG5-205ENST00000610462 KCNAB3O43448 404 aa23.97■■□□□ 1.43
CSPG5-205ENST00000610462 KIR2DL2P43627 348 aaPredicted RBP23.97■■□□□ 1.43
CSPG5-205ENST00000610462 PPP1CBP62140 327 aa23.97■■□□□ 1.43
CSPG5-205ENST00000610462 CNEP1R1Q8N9A8 125 aa23.97■■□□□ 1.43
CSPG5-205ENST00000610462 DMRTA2Q96SC8 542 aa23.97■■□□□ 1.43
CSPG5-205ENST00000610462 OR51I2Q9H344 312 aa23.97■■□□□ 1.43
CSPG5-205ENST00000610462 SCO1O75880 301 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 HOXB1P14653 301 aaPredicted RBP23.96■■□□□ 1.43
CSPG5-205ENST00000610462 NOVA1P51513 510 aaKnown RBP23.96■■□□□ 1.43
CSPG5-205ENST00000610462 SLC38A6Q8IZM9 456 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 PHYHIPLQ96FC7 376 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 GALNT14Q96FL9 552 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 SDHAF2Q9NX18 166 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 OR5AC2Q9NZP5 309 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 F5H0A9 414 aaPredicted RBP23.96■■□□□ 1.43
CSPG5-205ENST00000610462 HERV-K104P61576 105 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 RAB32Q13637 225 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 RTP5Q14D33 572 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 OR1S1Q8NH92 325 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 RTN4IP1Q8WWV3 396 aaPredicted RBP23.96■■□□□ 1.43
CSPG5-205ENST00000610462 RRNAD1Q96FB5 475 aaKnown RBP23.96■■□□□ 1.43
CSPG5-205ENST00000610462 RASL12Q9NYN1 266 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 GSKIPQ9P0R6 139 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 PFDN2Q9UHV9 154 aa23.96■■□□□ 1.43
CSPG5-205ENST00000610462 MFSD2BA6NFX1 497 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 PET100P0DJ07 73 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 AADACP22760 399 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 ZNF488Q96MN9 340 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 SPACA1Q9HBV2 294 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 B8ZZF3 427 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 IL13RA2Q14627 380 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 TMEM187Q14656 261 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 IGSF11Q5DX21 431 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 ZADH2Q8N4Q0 377 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 RELL2Q8NC24 303 aaPredicted RBP23.95■■□□□ 1.42
CSPG5-205ENST00000610462 RSRP1Q9BUV0 290 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 OR2J1Q9GZK6 312 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 SLC2A9Q9NRM0 540 aa23.95■■□□□ 1.42
CSPG5-205ENST00000610462 J3QT63 122 aa23.94■■□□□ 1.42
CSPG5-205ENST00000610462 TM4SF5O14894 197 aa23.94■■□□□ 1.42
CSPG5-205ENST00000610462 IFNA21P01568 189 aa23.94■■□□□ 1.42
CSPG5-205ENST00000610462 DUSP1P28562 367 aa23.94■■□□□ 1.42
CSPG5-205ENST00000610462 NUP62P37198 522 aaPredicted RBP23.94■■□□□ 1.42
CSPG5-205ENST00000610462 IAH1Q2TAA2 248 aaPredicted RBP23.94■■□□□ 1.42
CSPG5-205ENST00000610462 VWA1Q6PCB0 445 aa23.94■■□□□ 1.42
CSPG5-205ENST00000610462 FAM58AQ8N1B3 248 aa23.94■■□□□ 1.42
CSPG5-205ENST00000610462 SYT3Q9BQG1 590 aa23.94■■□□□ 1.42
CSPG5-205ENST00000610462 RTL8AQ9BWD3 113 aa23.94■■□□□ 1.42
CSPG5-205ENST00000610462 URB1O60287 2271 aaKnown RBP23.94■■□□□ 1.42
CSPG5-205ENST00000610462 PPYP01298 95 aa23.93■■□□□ 1.42
CSPG5-205ENST00000610462 COX5AP20674 150 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms