RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 LYPD2Q6UXB3 125 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 WDR86Q86TI4 376 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 CELF2-AS1Q8N7Q2 184 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 GDPD1Q8N9F7 314 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 DTX3Q8N9I9 347 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 OR5A2Q8NGI9 324 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 S100A13Q99584 98 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 SDHCQ99643 169 aaPredicted RBP9.61□□□□□ -0.87
LINC00539-204ENST00000608957 MICU1Q9BPX6 476 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 RTL8AQ9BWD3 113 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 CST11Q9H112 138 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 RABL2AQ9UBK7 228 aaPredicted RBP9.61□□□□□ -0.87
LINC00539-204ENST00000608957 RAB22AQ9UL26 194 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 PCDHB10Q9UN67 800 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 RABL2BQ9UNT1 228 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 PPIAL4EA0A075B759 164 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 A0A0A6YYH2 397 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 PPIAL4CA0A0B4J2A2 164 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 A6NJ64 397 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 PPIAL4DF5H284 164 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 FCN3O75636 299 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 UPK1BO75841 260 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 PLATP00750 562 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 PPIAL4FP0DN26 164 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 TMEM225BP0DP42 221 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 CDK2P24941 298 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 CD80P33681 288 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 MNDAP41218 407 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 GPM6AP51674 278 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 TUSC1Q2TAM9 212 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 SLC22A6Q4U2R8 563 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 KLF17Q5JT82 389 aaPredicted RBP9.6□□□□□ -0.87
LINC00539-204ENST00000608957 ZNF826PQ6ZT77 177 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 IZUMO1Q8IYV9 350 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 ZSCAN4Q8NAM6 433 aaPredicted RBP9.6□□□□□ -0.87
LINC00539-204ENST00000608957 PXT1Q8NFP0 134 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 OR8S1Q8NH09 359 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 KCNG3Q8TAE7 436 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 FAM46BQ96A09 425 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 DACT3Q96B18 629 aaPredicted RBP9.6□□□□□ -0.87
LINC00539-204ENST00000608957 PHF21AQ96BD5 680 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 RNF170Q96K19 258 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 TMEM59Q9BXS4 323 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 SLC22A4Q9H015 551 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 ATG5Q9H1Y0 275 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 OCEL1Q9H607 264 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 C7orf69Q9H7B7 122 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 ING4Q9UNL4 249 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 INSIG2Q9Y5U4 225 aa9.6□□□□□ -0.87
LINC00539-204ENST00000608957 ANK2Q01484 3957 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.59□□□□□ -0.87
LINC00539-204ENST00000608957 A0A1W2PP11 408 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 METTL21EPA6NDL7 271 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 C3orf80F5H4A9 247 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 TNFRSF13BO14836 293 aaPredicted RBP9.59□□□□□ -0.87
LINC00539-204ENST00000608957 XRCC3O43542 346 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 SPRY1O43609 319 aaPredicted RBP9.59□□□□□ -0.87
LINC00539-204ENST00000608957 ANGPTL7O43827 346 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 CRTAPO75718 401 aaPredicted RBP9.59□□□□□ -0.87
LINC00539-204ENST00000608957 SCGNO76038 276 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 TPPPO94811 219 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 KDM4BO94953 1096 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 FSTL3O95633 263 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 MPIG6BO95866 241 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 SERPINA2P20848 420 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 GATA3P23771 443 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 TAS2R20P59543 309 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 PITPNAQ00169 270 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 ZNF154Q13106 437 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 PDZK1IP1Q13113 114 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 FAM189A2Q15884 450 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 ASCL4Q6XD76 172 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 ZNF841Q6ZN19 808 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 CALHM1Q8IU99 346 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 SNX29P2Q8IUI4 249 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 C11orf53Q8IXP5 236 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 OR8H2Q8N162 312 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 MUC20Q8N307 709 aaPredicted RBP9.59□□□□□ -0.87
LINC00539-204ENST00000608957 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.59□□□□□ -0.87
LINC00539-204ENST00000608957 OR10K1Q8NGX5 313 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 C15orf40Q8WUR7 153 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 ERGIC1Q969X5 290 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 ABHD1Q96SE0 405 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 SLC6A7Q99884 636 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 METTL9Q9H1A3 318 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 ELL3Q9HB65 397 aaPredicted RBP9.59□□□□□ -0.87
LINC00539-204ENST00000608957 ESM1Q9NQ30 184 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 DIABLOQ9NR28 239 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 ABCB10Q9NRK6 738 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 IL36GQ9NZH8 169 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 CTSZQ9UBR2 303 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 PPIAL4AQ9Y536 164 aa9.59□□□□□ -0.87
LINC00539-204ENST00000608957 IGKV1-12A0A0C4DH73 117 aa9.58□□□□□ -0.88
LINC00539-204ENST00000608957 TMEM210A6NLX4 147 aa9.58□□□□□ -0.88
LINC00539-204ENST00000608957 J3QT63 122 aa9.58□□□□□ -0.88
LINC00539-204ENST00000608957 CTDSPLO15194 276 aa9.58□□□□□ -0.88
LINC00539-204ENST00000608957 ZNF780AO75290 641 aaPredicted RBP9.58□□□□□ -0.88
LINC00539-204ENST00000608957 CYB5AP00167 134 aa9.58□□□□□ -0.88
LINC00539-204ENST00000608957 IGKV1D-12P01611 117 aa9.58□□□□□ -0.88
LINC00539-204ENST00000608957 RPS2P15880 293 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms