RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 LIMS3P0CW19 117 aa11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 LIMS4P0CW20 117 aa11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 ERP29P30040 261 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 DYNC1I2Q13409 638 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 SMN1Q16637 294 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 PRR31Q5SQ13 230 aa11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 LIAT1Q6ZQX7 453 aa11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 SATL1Q86VE3 508 aa11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 C8orf59Q8N0T1 100 aaPredicted RBP11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 CNIH3Q8TBE1 160 aa11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 SPACA5Q96QH8 159 aa11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 S100A13Q99584 98 aa11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 MEGF9Q9H1U4 602 aa11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 PPA2Q9H2U2 334 aa11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 BABAM2Q9NXR7 383 aa11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 CKLFQ9UBR5 152 aa11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 UBE2J1Q9Y385 318 aaPredicted RBP11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 TBL2Q9Y4P3 447 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-210ENST00000607049 EFCAB10A6NFE3 127 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 TIMM23O14925 209 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 DEGS1O15121 323 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 CLIC3O95833 236 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 OR2H2O95918 312 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 IGHV1-8P0DP01 117 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 CALCBP10092 127 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 CAPGP40121 348 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 SOX2P48431 317 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 MTNR1BP49286 362 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 ETV1P50549 477 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 P2RX3P56373 397 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 CDK5R1Q15078 307 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 RSU1Q15404 277 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 OR52W1Q6IF63 320 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 HCP5Q6MZN7 132 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 OR4C13Q8NGP0 309 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 WFDC12Q8WWY7 111 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 TAF15Q92804 592 aaKnown RBP eCLIP11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 MALSU1Q96EH3 234 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 ZNF649Q9BS31 505 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 FAM192AQ9GZU8 254 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 PCDHB16Q9NRJ7 776 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 PITPNC1Q9UKF7 332 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 ZNF281Q9Y2X9 895 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 SESN1Q9Y6P5 492 aa11.73□□□□□ -0.53
PKNOX1-210ENST00000607049 PSPNO60542 156 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 ARHGDIBP52566 201 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 GTF2A1P52655 376 aaPredicted RBP11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 TAS2R43P59537 309 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 RELBQ01201 579 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 C11orf88Q6PI97 169 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 STX19Q8N4C7 294 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 C11orf42Q8N5U0 333 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 PXT1Q8NFP0 134 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 OR4S1Q8NGB4 309 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 OR11H6Q8NGC7 330 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 OR52N4Q8NGI2 321 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 OR52N1Q8NH53 320 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 LINC01006Q8NI28 216 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 TNFAIP8L1Q8WVP5 186 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 TMEM106AQ96A25 262 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 SMIM19Q96E16 107 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 C16orf95Q9H693 158 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 TMEM138Q9NPI0 162 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 PAK1IP1Q9NWT1 392 aaPredicted RBP11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 IL36RNQ9UBH0 155 aa11.72□□□□□ -0.53
PKNOX1-210ENST00000607049 IGKV1-12A0A0C4DH73 117 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 M0QZ24 198 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 TSPAN9O75954 239 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 CLPXO76031 633 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 IGKV1D-12P01611 117 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 CSTBP04080 98 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 LMO1P25800 156 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 GABRA5P31644 462 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 OR3A1P47881 315 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 DLX6P56179 175 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 ADARB1P78563 741 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 ST3GAL4Q11206 333 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 LY6EQ16553 131 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 MINOS1Q5TGZ0 78 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 OR2G6Q5TZ20 316 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 Q6ZSV7 163 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 TPRX1Q8N7U7 411 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 RPS4Y2Q8TD47 263 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 NR1H4Q96RI1 486 aaPredicted RBP11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 CDCA4Q9BXL8 241 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 CLEC7AQ9BXN2 247 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 NPFFR1Q9GZQ6 430 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 TMEM133Q9H2Q1 129 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 DCLRE1BQ9H816 532 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 TAS2R3Q9NYW6 316 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 CNOT2Q9NZN8 540 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 OR6C3Q9NZP0 311 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 MINOS1-NBL1R4GNA1 71 aa11.71□□□□□ -0.53
PKNOX1-210ENST00000607049 A0A0G2JK05 382 aa11.7□□□□□ -0.54
PKNOX1-210ENST00000607049 MEX3AA1L020 520 aaKnown RBP11.7□□□□□ -0.54
PKNOX1-210ENST00000607049 MYL12BO14950 172 aa11.7□□□□□ -0.54
PKNOX1-210ENST00000607049 OGG1O15527 345 aa11.7□□□□□ -0.54
PKNOX1-210ENST00000607049 ZNF780AO75290 641 aaPredicted RBP11.7□□□□□ -0.54
PKNOX1-210ENST00000607049 ALDOBP05062 364 aa11.7□□□□□ -0.54
PKNOX1-210ENST00000607049 CSN2P05814 226 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms