RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 LINC01548A6NM66 108 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 NCBP2LA6PVI3 153 aaKnown RBP12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 SAP30O75446 220 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 E2F6O75461 281 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 IGKV1D-33P01593 117 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 IGKV1-33P01594 117 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 GP9P14770 177 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 ALOX5APP20292 161 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 GDNFP39905 211 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 PTGFRP43088 359 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 POU3F4P49335 361 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 HMGA2P52926 109 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 ZNF91Q05481 1191 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 Q8IYB0 196 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 OR9G1Q8NH87 305 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 NSMCE2Q96MF7 247 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 MAGEL2Q9UJ55 1249 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 HYDINQ4G0P3 5121 aa12.02□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 HMGB1P1B2RPK0 211 aaPredicted RBP12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 H3BN98 237 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 PRODHO43272 600 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 SPNP16150 400 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 NFYBP25208 207 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 DUSP1P28562 367 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 GPR12P47775 334 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 OR3A1P47881 315 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 RIDAP52758 137 aaKnown RBP12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 HCCSP53701 268 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 SNU13P55769 128 aaKnown RBP12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 SRSF7Q16629 238 aaKnown RBP eCLIP12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 LHFPL2Q6ZUX7 228 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 SLC25A26Q70HW3 274 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 IQCF1Q8N6M8 205 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 RNF152Q8N8N0 203 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 CORO2AQ92828 525 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 PLEKHA1Q9HB21 404 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 SEBOXQ9HB31 216 aaPredicted RBP12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 IL36RNQ9UBH0 155 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 V9GYS6 101 aa12.01□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 DSCAML1Q8TD84 2053 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 TRIM64CA6NLI5 447 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 LOC110117498-PIK3R3F6TDL0 507 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 SIRPB1O00241 398 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 ZNF254O75437 659 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 CYB5AP00167 134 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 TTRP02766 147 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 VDAC1P21796 283 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 RAB7AP51149 207 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 CDC42P60953 191 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 ZNF616Q08AN1 781 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 BCL2L15Q5TBC7 163 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 ZNF679Q8IYX0 411 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 FAM58AQ8N1B3 248 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 ABCG5Q9H222 651 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 FGFR1OP2Q9NVK5 253 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 IKZF2Q9UKS7 526 aa12□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 A0A087X0M5 115 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 A0A1B0GX30 115 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 DHRS7CA6NNS2 312 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 OVOL1O14753 267 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 IFNA6P05013 189 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 PRKACAP17612 351 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 MYF6P23409 242 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 GLIPR1P48060 266 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 FUT6P51993 359 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 GABPB1Q06547 395 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 AESQ08117 197 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 MFGE8Q08431 387 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 PPP1R8Q12972 351 aaKnown RBP11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 BNIP1Q12981 228 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 MADCAM1Q13477 382 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 SPIN3Q5JUX0 258 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 SLC35D3Q5M8T2 416 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 TGIF2LXQ8IUE1 241 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 OR8H3Q8N146 312 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 OR6Q1Q8NGQ2 317 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 OR1N2Q8NGR9 330 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 OR14K1Q8NGZ2 314 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 IL17DQ8TAD2 202 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 BORCS8Q96FH0 119 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 SPATA25Q9BR10 227 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 DGCR6LQ9BY27 220 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 TTTY10Q9BZA0 68 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 YIPF3Q9GZM5 350 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 GHITMQ9H3K2 345 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 MOB1AQ9H8S9 216 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 EXOSC4Q9NPD3 245 aaKnown RBP11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 LIN7CQ9NUP9 197 aaKnown RBP11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 RBFOX1Q9NWB1 397 aaKnown RBP11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 CHCHD3Q9NX63 227 aaKnown RBP11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 ING3Q9NXR8 418 aa11.99□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 A0A1W2PPI3 338 aa11.98□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 ZNF729A6NN14 1252 aaPredicted RBP11.98□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 J3QR06 171 aa11.98□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 SH2D1BO14796 132 aa11.98□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 MPZL2O60487 215 aa11.98□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 ZNF146Q15072 292 aa11.98□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 TMEM65Q6PI78 240 aa11.98□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 HAVCR2Q8TDQ0 301 aa11.98□□□□□ -0.49
NEDD8-MDP1-204ENST00000605847 ASB17Q8WXJ9 295 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms