RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 TMEM235A6NFC5 223 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 A6NLC8 198 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 FOXI3A8MTJ6 420 aaPredicted RBP8.5□□□□□ -1.05
UPF1-213ENST00000601981 LY6HO94772 140 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 MT-ND4P03905 459 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 AKAIN1P0CW23 69 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 HIST1H1DP16402 221 aaKnown RBP8.5□□□□□ -1.05
UPF1-213ENST00000601981 SERPINA2P20848 420 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 CPT2P23786 658 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 RCVRNP35243 200 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 GPR6P46095 362 aaPredicted RBP8.5□□□□□ -1.05
UPF1-213ENST00000601981 GNG3P63215 75 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 GUCA2AQ02747 115 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 PDZK1IP1Q13113 114 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 RSU1Q15404 277 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 PNLIPRP3Q17RR3 467 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 CDNFQ49AH0 187 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 DMRTC1Q5HYR2 192 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 SAXO1Q8IYX7 474 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 TMEM229BQ8NBD8 167 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 CHST4Q8NCG5 386 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 OR5A2Q8NGI9 324 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 OR51T1Q8NGJ9 327 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 C10orf105Q8TEF2 133 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 HPSE2Q8WWQ2 592 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 RAB1CQ92928 201 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 DVL3Q92997 716 aaPredicted RBP8.5□□□□□ -1.05
UPF1-213ENST00000601981 UPRTQ96BW1 309 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 RAB3CQ96E17 227 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 MRPS24Q96EL2 167 aaKnown RBP8.5□□□□□ -1.05
UPF1-213ENST00000601981 POM121Q96HA1 1249 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 RNF170Q96K19 258 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 Q96M66 194 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 NEURL2Q9BR09 285 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 NICN1Q9BSH3 213 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 BANF2Q9H503 90 aa8.5□□□□□ -1.05
UPF1-213ENST00000601981 DOCK11Q5JSL3 2073 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 hCG_1807616A0A1W2PRN6 198 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 LRP5LA4QPB2 252 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 INMT-MINDY4F8WBC2 141 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 MFNGO00587 321 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 PPIHO43447 177 aaKnown RBP8.49□□□□□ -1.05
UPF1-213ENST00000601981 AKR7A2O43488 359 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 SPRY1O43609 319 aaPredicted RBP8.49□□□□□ -1.05
UPF1-213ENST00000601981 CA11O75493 328 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 CSTBP04080 98 aaKnown RBP8.49□□□□□ -1.05
UPF1-213ENST00000601981 HEXAP06865 529 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 GRPP07492 148 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 TRAPPC2P0DI81 140 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 TRAPPC2BP0DI82 140 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 GTF2F2P13984 249 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 GIFP27352 417 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 RAG2P55895 527 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 TMEM50BP56557 158 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 TAS2R19P59542 299 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 MAB21L1Q13394 359 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 SPNS3Q6ZMD2 512 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 BTN2A1Q7KYR7 527 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 MOGAT3Q86VF5 341 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 GLCCI1Q86VQ1 547 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 ZNF573Q86YE8 665 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 Q8NFD4 153 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 OR10K1Q8NGX5 313 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 Q8TCH9 128 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 OR5P3Q8WZ94 311 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 SELENOIQ9C0D9 397 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 FGF23Q9GZV9 251 aaPredicted RBP8.49□□□□□ -1.05
UPF1-213ENST00000601981 ELL3Q9HB65 397 aaPredicted RBP8.49□□□□□ -1.05
UPF1-213ENST00000601981 GCM1Q9NP62 436 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 TMEM106BQ9NUM4 274 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 UFSP2Q9NUQ7 469 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 ANAPC10Q9UM13 185 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 C2CD3Q4AC94 2353 aa8.49□□□□□ -1.05
UPF1-213ENST00000601981 MAP1AP78559 2803 aaPredicted RBP8.48□□□□□ -1.05
UPF1-213ENST00000601981 ITPR3Q14573 2671 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 A0A0B4J293 547 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 SERPINE3A8MV23 424 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 ZNF732B4DXR9 585 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 LYNX1G3V0Z9 82 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 SOCS1O15524 211 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 ANGPTL7O43827 346 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 RP2O75695 350 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 HTR3BO95264 441 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 PTBP3O95758 552 aaKnown RBP8.48□□□□□ -1.05
UPF1-213ENST00000601981 CYB5AP00167 134 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 TCRBP04435 133 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 LYNX1P0DP58 116 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 GNB3P16520 340 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 COL8A2P25067 703 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 HLA-DMAP28067 261 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 CBX5P45973 191 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 GPM6AP51674 278 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 RIPPLY3P57055 190 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 GNG2P59768 71 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 KCNJ8Q15842 424 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 TATDN3Q17R31 274 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 C11orf91Q3C1V1 193 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 PLAC9Q5JTB6 97 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 PRAMEF6Q5VXH4 476 aa8.48□□□□□ -1.05
UPF1-213ENST00000601981 STEAP1BQ6NZ63 245 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms