RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 PARP16Q8N5Y8 322 aa11.66□□□□□ -0.54
IRF3-224ENST00000599680 TPRX1Q8N7U7 411 aa11.66□□□□□ -0.54
IRF3-224ENST00000599680 LINC01006Q8NI28 216 aa11.66□□□□□ -0.54
IRF3-224ENST00000599680 C17orf50Q8WW18 174 aa11.66□□□□□ -0.54
IRF3-224ENST00000599680 JAM3Q9BX67 310 aa11.66□□□□□ -0.54
IRF3-224ENST00000599680 EXOSC1Q9Y3B2 195 aaKnown RBP11.66□□□□□ -0.54
IRF3-224ENST00000599680 LINC00312Q9Y6C7 94 aa11.66□□□□□ -0.54
IRF3-224ENST00000599680 TET2Q6N021 2002 aaPredicted RBP11.65□□□□□ -0.54
IRF3-224ENST00000599680 MGAM2Q2M2H8 2515 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 KDM4BO94953 1096 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 IGHV1-8P0DP01 117 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 SOX2P48431 317 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 GTF2A1P52655 376 aaPredicted RBP11.65□□□□□ -0.54
IRF3-224ENST00000599680 KISS1Q15726 138 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 CCDC58Q4VC31 144 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 Q6ZSV7 163 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 OR4S1Q8NGB4 309 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 OR52N4Q8NGI2 321 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 GPR148Q8TDV2 347 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 FOXRED1Q96CU9 486 aaPredicted RBP11.65□□□□□ -0.54
IRF3-224ENST00000599680 ZNF649Q9BS31 505 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 MEGF9Q9H1U4 602 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 RAB18Q9NP72 206 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 ABCB10Q9NRK6 738 aa11.65□□□□□ -0.54
IRF3-224ENST00000599680 TBL2Q9Y4P3 447 aaKnown RBP11.65□□□□□ -0.54
IRF3-224ENST00000599680 TRGV10A0A0A0MS01 117 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 IGKV1-12A0A0C4DH73 117 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 TIMM23O14925 209 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 PSPNO60542 156 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 CLPXO76031 633 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 ALX3O95076 343 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 OR2H2O95918 312 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 IGKV1D-12P01611 117 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 PAX6P26367 422 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 ERP29P30040 261 aaKnown RBP11.64□□□□□ -0.55
IRF3-224ENST00000599680 OR3A1P47881 315 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 P2RX3P56373 397 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 SRSF4Q08170 494 aaKnown RBP11.64□□□□□ -0.55
IRF3-224ENST00000599680 IL18R1Q13478 541 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 CDK5R1Q15078 307 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 AANATQ16613 207 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 PLA1AQ53H76 456 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 OR2G6Q5TZ20 316 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 OR4C13Q8NGP0 309 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 TMEM80Q96HE8 168 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 FAM192AQ9GZU8 254 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 VCXQ9H320 206 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 GAL3ST2Q9H3Q3 398 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 C16orf95Q9H693 158 aa11.64□□□□□ -0.55
IRF3-224ENST00000599680 DIMT1Q9UNQ2 313 aaKnown RBP11.64□□□□□ -0.55
IRF3-224ENST00000599680 DEGS1O15121 323 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 MTNR1BP49286 362 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 PPP3R1P63098 170 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 FAM189A2Q15884 450 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 TREML4Q6UXN2 200 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 LIAT1Q6ZQX7 453 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 RNF144BQ7Z419 303 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 LHFPL4Q7Z7J7 247 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 C8orf59Q8N0T1 100 aaPredicted RBP11.63□□□□□ -0.55
IRF3-224ENST00000599680 CHST4Q8NCG5 386 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 NDNFQ8TB73 568 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 TNFAIP8L1Q8WVP5 186 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 TMEM106AQ96A25 262 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 AJUBAQ96IF1 538 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 NR1H4Q96RI1 486 aaPredicted RBP11.63□□□□□ -0.55
IRF3-224ENST00000599680 TCF7L1Q9HCS4 588 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 TAS2R4Q9NYW5 299 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 UBE2J1Q9Y385 318 aaPredicted RBP11.63□□□□□ -0.55
IRF3-224ENST00000599680 SESN1Q9Y6P5 492 aa11.63□□□□□ -0.55
IRF3-224ENST00000599680 ODF3BA8MYP8 253 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 M0QZ24 198 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 TSPAN9O75954 239 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 GABRA5P31644 462 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 ADARB1P78563 741 aaKnown RBP11.62□□□□□ -0.55
IRF3-224ENST00000599680 AESQ08117 197 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 RSU1Q15404 277 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 SSX2Q16385 188 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 ZNF626Q68DY1 528 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 XAF1Q6GPH4 301 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 SLC35E4Q6ICL7 350 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 OR52W1Q6IF63 320 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 TCF23Q7RTU1 214 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 DTX3Q8N9I9 347 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 OR11H6Q8NGC7 330 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 RPS4Y2Q8TD47 263 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 RGP1Q92546 391 aaPredicted RBP11.62□□□□□ -0.55
IRF3-224ENST00000599680 SMIM19Q96E16 107 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 MALSU1Q96EH3 234 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 S100A13Q99584 98 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 NKX3-1Q99801 234 aaPredicted RBP11.62□□□□□ -0.55
IRF3-224ENST00000599680 CITED1Q99966 193 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 CLEC7AQ9BXN2 247 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 TMEM133Q9H2Q1 129 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 BABAM2Q9NXR7 383 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 ING3Q9NXR8 418 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 ZNF281Q9Y2X9 895 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 HSPE1-MOB4S4R3N1 261 aa11.62□□□□□ -0.55
IRF3-224ENST00000599680 IGHV2-26A0A0B4J1V2 119 aa11.61□□□□□ -0.55
IRF3-224ENST00000599680 A0A0G2JK05 382 aa11.61□□□□□ -0.55
IRF3-224ENST00000599680 EFCAB10A6NFE3 127 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms