RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 MOGAT1Q96PD6 335 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 WDR13Q9H1Z4 485 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 RGPD5Q99666 1765 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 IGKV3-7A0A075B6H7 116 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 RHBDL1O75783 438 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 IGF2P01344 180 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 PSG5Q15238 335 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 TMEM65Q6PI78 240 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 OR4P4Q8NGL7 312 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 SSMEM1Q8WWF3 244 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 PACRGQ96M98 296 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-208ENST00000599343 DDX60Q8IY21 1712 aaKnown RBP10.48□□□□□ -0.73
SCN8A-208ENST00000599343 KCNE1BA0A087WTH5 132 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 SEMA7AO75326 666 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 KLF3P57682 345 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-208ENST00000599343 DLK1P80370 383 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 SFTPA2Q8IWL1 248 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 SFTPA1Q8IWL2 248 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 RGP1Q92546 391 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-208ENST00000599343 ZNF707Q96C28 371 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-208ENST00000599343 R3HDM4Q96D70 268 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 CDC42EP2O14613 210 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 GEMIN2O14893 280 aaKnown RBP10.48□□□□□ -0.73
SCN8A-208ENST00000599343 GSTZ1O43708 216 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-208ENST00000599343 MGPP08493 103 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 CD1BP29016 333 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 DPPA3Q6W0C5 159 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 EIF4E3Q8N5X7 224 aaKnown RBP10.48□□□□□ -0.73
SCN8A-208ENST00000599343 LINC01555Q8NAE3 123 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 CA5BP1Q8WTZ4 195 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 ZNF426Q9BUY5 554 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 MAP1LC3CQ9BXW4 147 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 hADV38S2A0JD32 116 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 DNPH1O43598 174 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 RPL30P62888 115 aaKnown RBP10.47□□□□□ -0.73
SCN8A-208ENST00000599343 IL24Q13007 206 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 ZNF141Q15928 474 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 CLEC18BQ6UXF7 455 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 SPEM1Q8N4L4 309 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 OR10G8Q8NGN5 311 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 ELOVL1Q9BW60 279 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 MANBALQ9NQG1 85 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 IL17BQ9UHF5 180 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 PHIPQ8WWQ0 1821 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 LEUTXA8MZ59 168 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 LINC01387J3KSC0 135 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 CT62P0C5K7 136 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 OR4A8P0C604 315 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 APELAP0DMC3 54 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 TMEM191AQ9H0A3 160 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 CXXC4Q9H2H0 198 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 CYB5R1Q9UHQ9 305 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 FUT9Q9Y231 359 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 AMMECR1Q9Y4X0 333 aaPredicted RBP10.47□□□□□ -0.73
SCN8A-208ENST00000599343 MFNGO00587 321 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 CHST1O43916 411 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 NTN1O95631 604 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 PCMT1P22061 227 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 GALP22466 123 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 ATP6V1FQ16864 119 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 JMJD6Q6NYC1 403 aaPredicted RBP10.47□□□□□ -0.73
SCN8A-208ENST00000599343 OR52L2PQ8NGH6 319 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 OR4D10Q8NGI6 311 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 MARVELD1Q9BSK0 173 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 TRAF4Q9BUZ4 470 aaPredicted RBP10.47□□□□□ -0.73
SCN8A-208ENST00000599343 PRSS50Q9UI38 385 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 TRAV17A0A0B4J275 112 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 SOCS1O15524 211 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 ORM1P02763 201 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 AREGP15514 252 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 PPP1CAP62136 330 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 DHRS13Q6UX07 377 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 D2HGDHQ8N465 521 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 MRPL37Q9BZE1 423 aaKnown RBP10.47□□□□□ -0.73
SCN8A-208ENST00000599343 MRM2Q9UI43 246 aaKnown RBP10.47□□□□□ -0.73
SCN8A-208ENST00000599343 STARD10Q9Y365 291 aa10.47□□□□□ -0.73
SCN8A-208ENST00000599343 MELTFP08582 738 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 CBLN3Q6UW01 205 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 ZNF383Q8NA42 475 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 TECRQ9NZ01 308 aaKnown RBP10.46□□□□□ -0.73
SCN8A-208ENST00000599343 HSF4Q9ULV5 492 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 HELTA6NFD8 242 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 HMSDA8MTL9 139 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 ACER2Q5QJU3 275 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 ZNF770Q6IQ21 691 aaPredicted RBP10.46□□□□□ -0.73
SCN8A-208ENST00000599343 ZNF784Q8NCA9 323 aaPredicted RBP10.46□□□□□ -0.73
SCN8A-208ENST00000599343 OR8A1Q8NGG7 326 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 OR5A2Q8NGI9 324 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 ASB10Q8WXI3 467 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 PCOLCE2Q9UKZ9 415 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 ELOA3CA0A087WX78 387 aaPredicted RBP10.46□□□□□ -0.73
SCN8A-208ENST00000599343 OR5B21A6NL26 309 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 P01737 135 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 ACAA1P09110 424 aaPredicted RBP10.46□□□□□ -0.73
SCN8A-208ENST00000599343 P2RY1P47900 373 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 CEBPDP49716 269 aaPredicted RBP10.46□□□□□ -0.73
SCN8A-208ENST00000599343 RAG2P55895 527 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 KIAA0040Q15053 153 aa10.46□□□□□ -0.73
SCN8A-208ENST00000599343 RP1L1Q8IWN7 2480 aaPredicted RBP10.46□□□□□ -0.74
SCN8A-208ENST00000599343 NRXN3Q9Y4C0 1643 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms