RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 KPNB1Q14974 876 aaKnown RBP7.94□□□□□ -1.14
TRIM28-210ENST00000597618 SLC35D3Q5M8T2 416 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 Q8IYB0 196 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 ZNF679Q8IYX0 411 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 RNF152Q8N8N0 203 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 OR4D6Q8NGJ1 314 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 C4orf3Q8WVX3 66 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 CADM1Q9BY67 442 aaKnown RBP7.94□□□□□ -1.14
TRIM28-210ENST00000597618 YIPF3Q9GZM5 350 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 GTF2A1LQ9UNN4 478 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 AMMECR1Q9Y4X0 333 aaPredicted RBP7.94□□□□□ -1.14
TRIM28-210ENST00000597618 U3KQV3 271 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 SORL1Q92673 2214 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 ALMS1Q8TCU4 4167 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 ELANEP08246 267 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 HSD17B1P14061 328 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 GDNFP39905 211 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 RIDAP52758 137 aaKnown RBP7.93□□□□□ -1.14
TRIM28-210ENST00000597618 CDC42P60953 191 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 MFGE8Q08431 387 aaPredicted RBP7.93□□□□□ -1.14
TRIM28-210ENST00000597618 GPR50Q13585 617 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 ZNF146Q15072 292 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 MICAQ29983 383 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 BCL2L15Q5TBC7 163 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 CD300LDQ6UXZ3 194 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 SLC25A26Q70HW3 274 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 ZNF429Q86V71 674 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 OR14K1Q8NGZ2 314 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 ASB17Q8WXJ9 295 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 CORO2AQ92828 525 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 CMTM5Q96DZ9 223 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 RNFT2Q96EX2 444 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 HRASLS5Q96KN8 279 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 EDA2RQ9HAV5 297 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 PLEKHA1Q9HB21 404 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 IL36RNQ9UBH0 155 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 IKZF2Q9UKS7 526 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 TMEM14AQ9Y6G1 99 aa7.93□□□□□ -1.14
TRIM28-210ENST00000597618 IGKV1-27A0A075B6S5 117 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 TRBV2A0A0J9YWF9 115 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 A0A1W2PPI3 338 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 A6NIN4 97 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 LOC110117498-PIK3R3F6TDL0 507 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 RRP9O43818 475 aaKnown RBP7.92□□□□□ -1.14
TRIM28-210ENST00000597618 INMTO95050 263 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 HCKP08631 526 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 OR8U8P0C7N1 319 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 MAGEA2P43356 314 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 GPR12P47775 334 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 VEGFCP49767 419 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 HCCSP53701 268 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 PPP1R8Q12972 351 aaKnown RBP7.92□□□□□ -1.14
TRIM28-210ENST00000597618 MADCAM1Q13477 382 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 HNF4GQ14541 408 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 SPIN3Q5JUX0 258 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 Q6ZSR3 168 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 CPOQ8IVL8 374 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 ELMOD2Q8IZ81 293 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 OR9G1Q8NH87 305 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 TM2D3Q9BRN9 247 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 CCDC134Q9H6E4 229 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 REEP1Q9H902 201 aa7.92□□□□□ -1.14
TRIM28-210ENST00000597618 RBFOX1Q9NWB1 397 aaKnown RBP7.92□□□□□ -1.14
TRIM28-210ENST00000597618 SAMHD1Q9Y3Z3 626 aaKnown RBP7.92□□□□□ -1.14
TRIM28-210ENST00000597618 A0A1B0GTI1 187 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 ODAMA1E959 279 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 PRR32B1ATL7 298 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 SIRPB1O00241 398 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 LDLRAD4O15165 306 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 ENTPD6O75354 484 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 SRSF10O75494 262 aaKnown RBP7.91□□□□□ -1.14
TRIM28-210ENST00000597618 GATBO75879 557 aaKnown RBP7.91□□□□□ -1.14
TRIM28-210ENST00000597618 CYB5AP00167 134 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 IGKV1D-33P01593 117 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 IGKV1-33P01594 117 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 HMGN1P05114 100 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 PRKACAP17612 351 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 SLC2A5P22732 501 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 NFYBP25208 207 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 DUSP1P28562 367 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 RAB7AP51149 207 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 FUT6P51993 359 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 C16orf89Q6UX73 402 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 TGIF2LXQ8IUE1 241 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 OR8H3Q8N146 312 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 FAM58AQ8N1B3 248 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 BBS1Q8NFJ9 593 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 OR11H1Q8NG94 326 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 OR10G2Q8NGC3 310 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 BORCS8Q96FH0 119 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 NIPSNAP1Q9BPW8 284 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 EXOSC4Q9NPD3 245 aaKnown RBP7.91□□□□□ -1.14
TRIM28-210ENST00000597618 ISYNA1Q9NPH2 558 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 LIN7CQ9NUP9 197 aaKnown RBP7.91□□□□□ -1.14
TRIM28-210ENST00000597618 OR52A1Q9UKL2 312 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 R4GMQ9 66 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 PCLOQ9Y6V0 5065 aa7.91□□□□□ -1.14
TRIM28-210ENST00000597618 FRAS1Q86XX4 4008 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 LINC01548A6NM66 108 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 ZNF729A6NN14 1252 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms