RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TCF21O43680 179 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 GPX5O75715 221 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 OR2H2O95918 312 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 CPEP16870 476 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 FSTP19883 344 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 PSMB9P28065 219 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 MTNR1BP49286 362 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 RPL31P62899 125 aaKnown RBP9.13□□□□□ -0.95
LIG1-211ENST00000596457 GPR50Q13585 617 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 TPBGQ13641 420 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 BLMHQ13867 455 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 TBCEQ15813 527 aaPredicted RBP9.13□□□□□ -0.95
LIG1-211ENST00000596457 GRK1Q15835 563 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 HSD17B12Q53GQ0 312 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 SPIN3Q5JUX0 258 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 GPR157Q5UAW9 335 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 RUSC1-AS1Q66K80 236 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 METAP1DQ6UB28 335 aaPredicted RBP9.13□□□□□ -0.95
LIG1-211ENST00000596457 SPARTQ8N0X7 666 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 TPRX1Q8N7U7 411 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 PXT1Q8NFP0 134 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 OR4S1Q8NGB4 309 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 OR5D13Q8NGL4 314 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 ZNF418Q8TF45 676 aaPredicted RBP9.13□□□□□ -0.95
LIG1-211ENST00000596457 THRSPQ92748 146 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 UPRTQ96BW1 309 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 TBX15Q96SF7 602 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 SIRPDQ9H106 197 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 MRPS28Q9Y2Q9 187 aaKnown RBP9.13□□□□□ -0.95
LIG1-211ENST00000596457 LRRC42Q9Y546 428 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 HSPB6O14558 160 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 PSPNO60542 156 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 FSHBP01225 129 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 MMP9P14780 707 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 CCL3L1P16619 93 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 KLRD1Q13241 179 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 ZNF146Q15072 292 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 TRAM1Q15629 374 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 C11orf91Q3C1V1 193 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 PIGYQ3MUY2 71 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 SLC22A6Q4U2R8 563 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 TMEM200BQ69YZ2 307 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 AWAT2Q6E213 333 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 GLIPR1L1Q6UWM5 242 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 C17orf107Q6ZR85 190 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 PHC2Q8IXK0 858 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 OSR2Q8N2R0 312 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 C8orf46Q8TAG6 207 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 PPP1R35Q8TAP8 253 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 SUCNR1Q9BXA5 334 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 FAM234AQ9H0X4 552 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 SLITRK2Q9H156 845 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 PPA2Q9H2U2 334 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 RHOFQ9HBH0 211 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 KPTNQ9Y664 436 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 WNK2Q9Y3S1 2297 aa9.12□□□□□ -0.95
LIG1-211ENST00000596457 TRBV23-1A0A0A0MS06 115 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 A0A0A6YYJ9 748 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 CENPVL3A0A0U1RRI6 287 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 A0A1W2PP11 408 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 A0A1W2PPH5 198 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 MEGF11A6BM72 1044 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 MRPS14O60783 128 aaKnown RBP9.11□□□□□ -0.95
LIG1-211ENST00000596457 ZNF737O75373 536 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 SRMP19623 302 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 BMXP51813 675 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 GP2P55259 537 aaKnown RBP9.11□□□□□ -0.95
LIG1-211ENST00000596457 ERVFRD-1P60508 538 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 FABP5Q01469 135 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 ZNF273Q14593 569 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 GLT8D1Q68CQ7 371 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 ELP2Q6IA86 826 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 Q6P435 159 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 RBMS3Q6XE24 437 aaKnown RBP9.11□□□□□ -0.95
LIG1-211ENST00000596457 TMEM91Q6ZNR0 172 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 TRAPPC6BQ86SZ2 158 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 OR8H2Q8N162 312 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 Q8N7P7 452 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 SIGLECL1Q8N7X8 197 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 PPIL3Q9H2H8 161 aaKnown RBP9.11□□□□□ -0.95
LIG1-211ENST00000596457 BANF2Q9H503 90 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 ST3GAL6Q9Y274 331 aa9.11□□□□□ -0.95
LIG1-211ENST00000596457 SF3B6Q9Y3B4 125 aaKnown RBP9.11□□□□□ -0.95
LIG1-211ENST00000596457 IGHV1-69DA0A0B4J2H0 117 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 A0A0G2JK05 382 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 MDFIC2A0A1B0GVS7 189 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 M0R1W7 72 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 SLC33A1O00400 549 aaPredicted RBP9.1□□□□□ -0.95
LIG1-211ENST00000596457 MGST3O14880 152 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 CRTAPO75718 401 aaPredicted RBP9.1□□□□□ -0.95
LIG1-211ENST00000596457 VENTXO95231 258 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 IGHV1-69P01742 117 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 UCHL1P09936 223 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 PSMA1P25786 263 aaKnown RBP9.1□□□□□ -0.95
LIG1-211ENST00000596457 CALRP27797 417 aaKnown RBP9.1□□□□□ -0.95
LIG1-211ENST00000596457 GABRA5P31644 462 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 OR3A1P47881 315 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 AESQ08117 197 aa9.1□□□□□ -0.95
LIG1-211ENST00000596457 ATXN7L3Q14CW9 347 aaPredicted RBP9.1□□□□□ -0.95
LIG1-211ENST00000596457 NEDD8Q15843 81 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms