RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 BORCS8Q96FH0 119 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 ZNF649Q9BS31 505 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 GAL3ST2Q9H3Q3 398 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 PLEKHA1Q9HB21 404 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 PAPOLBQ9NRJ5 636 aaKnown RBP7.89□□□□□ -1.15
LIG1-209ENST00000596104 CLN6Q9NWW5 311 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 TAS2R3Q9NYW6 316 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 MOB4Q9Y3A3 225 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 PCDHGB5Q9Y5G0 923 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 HSPE1-MOB4S4R3N1 261 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 U3KQK5 164 aa7.89□□□□□ -1.15
LIG1-209ENST00000596104 STAB2Q8WWQ8 2551 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 A0A087X0M5 115 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 TRGV10A0A0A0MS01 117 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 IGKV1-9A0A0C4DH69 117 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 A0A1B0GX30 115 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 OOSP1A8MZH6 123 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 ZNF670-ZNF695F2Z2N8 137 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 H3BSH0 61 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 M0R129 80 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 SYT7O43581 403 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 CALCBP10092 127 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 BCL3P20749 454 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 SLC6A1P30531 599 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 CEACAM3P40198 252 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 MYCNOSP40205 109 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 OR3A4PP47883 348 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 GLIPR1P48060 266 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 CDC42P60953 191 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 DGCR2P98153 550 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 PTGES3Q15185 160 aaKnown RBP7.88□□□□□ -1.15
LIG1-209ENST00000596104 ODF4Q2M2E3 257 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 C9orf152Q5JTZ5 239 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 SPIN3Q5JUX0 258 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 FAM58AQ8N1B3 248 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 DNAAF1Q8NEP3 725 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 LRGUKQ96M69 825 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 HMG20AQ9NP66 347 aa7.88□□□□□ -1.15
LIG1-209ENST00000596104 LSM4Q9Y4Z0 139 aaKnown RBP7.88□□□□□ -1.15
LIG1-209ENST00000596104 IGKV1-12A0A0C4DH73 117 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 AQP12BA6NM10 295 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 SIRPB1O00241 398 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 RPP14O95059 124 aaKnown RBP7.87□□□□□ -1.15
LIG1-209ENST00000596104 OR2H2O95918 312 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 IGKV1D-12P01611 117 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 PRKACAP17612 351 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 LMO1P25800 156 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 MNDAP41218 407 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 POU3F4P49335 361 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 RBP2P50120 134 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 SNU13P55769 128 aaKnown RBP7.87□□□□□ -1.15
LIG1-209ENST00000596104 CBX1P83916 185 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 AESQ08117 197 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 NXNL2Q5VZ03 156 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 CCDC144NLQ6NUI1 221 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 FAHD1Q6P587 224 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 THNSL2Q86YJ6 484 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 AQP12AQ8IXF9 295 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 C5orf56Q8N8D9 126 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 CCDC54Q8NEL0 328 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 CHPT1Q8WUD6 406 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 DNAJC9Q8WXX5 260 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 PP6455Q8WZ26 134 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 TFAP2CQ92754 450 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 RNF166Q96A37 237 aaPredicted RBP7.87□□□□□ -1.15
LIG1-209ENST00000596104 CREB3L1Q96BA8 519 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 C10orf35Q96D05 121 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 ADAT3Q96EY9 351 aaPredicted RBP7.87□□□□□ -1.15
LIG1-209ENST00000596104 COQ2Q96H96 371 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 NSL1Q96IY1 281 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 NOL4LQ96MY1 436 aaPredicted RBP7.87□□□□□ -1.15
LIG1-209ENST00000596104 ZFP57Q9NU63 452 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 ZMAT5Q9UDW3 170 aaKnown RBP7.87□□□□□ -1.15
LIG1-209ENST00000596104 DSCAML1Q8TD84 2053 aa7.87□□□□□ -1.15
LIG1-209ENST00000596104 LOC107986453A0A1B0GWG9 222 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 A0A1W2PPI3 338 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 ODAMA1E959 279 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 FUOMA2VDF0 154 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 NUDT19A8MXV4 375 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 TOR1AO14656 332 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 RAMP3O60896 148 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 SERPINA3P01011 423 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 KRT8P05787 483 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 CSN2P05814 226 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 SNRNP70P08621 437 aaKnown RBP7.86□□□□□ -1.15
LIG1-209ENST00000596104 FAM106CPP0CH98 169 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 CGB3P0DN86 165 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 CGB7P0DN87 165 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 T-ENOLP0DO92 83 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 HOXB6P17509 224 aaKnown RBP7.86□□□□□ -1.15
LIG1-209ENST00000596104 EPHA2P29317 976 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 PTGFRP43088 359 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 DAPP51397 102 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 ATP1B3P54709 279 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 PRRX1P54821 245 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 C17orf58Q2M2W7 97 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 C12orf73Q69YU5 71 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 UNQ9370/PRO34162Q6UXP9 181 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 PRSS35Q8N3Z0 413 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 TCEANCQ8N8B7 351 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms