RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 SVOPQ8N4V2 548 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 TEX29Q8N6K0 151 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 Q8N7P7 452 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 TPRX1Q8N7U7 411 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 OR4S1Q8NGB4 309 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 OR4D6Q8NGJ1 314 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 YTHDF1Q9BYJ9 559 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 FAM234AQ9H0X4 552 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 EXOSC4Q9NPD3 245 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 SIRT7Q9NRC8 400 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 NUP50Q9UKX7 468 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 LRRC42Q9Y546 428 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 MXRA5Q9NR99 2828 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 TRBV23-1A0A0A0MS06 115 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 SH2D1BO14796 132 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 MRPS14O60783 128 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 IFNA2P01563 188 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 UCHL1P09936 223 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 CCL3L1P16619 93 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 PSMB9P28065 219 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 OR3A1P47881 315 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 EDDM3BP56851 147 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 ERVFRD-1P60508 538 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 RPL31P62899 125 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 KLRD1Q13241 179 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 ZNF273Q14593 569 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 C11orf91Q3C1V1 193 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 HSD17B12Q53GQ0 312 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 UBE2UQ5VVX9 321 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 TMEM200BQ69YZ2 307 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 ELP2Q6IA86 826 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 ZNF773Q6PK81 442 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 TCF23Q7RTU1 214 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 LYPD6Q86Y78 171 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 OR8H2Q8N162 312 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 THRSPQ92748 146 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 LHX4Q969G2 390 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 SNX22Q96L94 193 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 PPA2Q9H2U2 334 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 TCF7L1Q9HCS4 588 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 MRPS28Q9Y2Q9 187 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 KPTNQ9Y664 436 aa11.33□□□□□ -0.6
SHKBP1-207ENST00000595631 CENPVL3A0A0U1RRI6 287 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 MDFIC2A0A1B0GVS7 189 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 SLC33A1O00400 549 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 HSPB6O14558 160 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 ZNF44P15621 663 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 GABRA5P31644 462 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 GRK1Q15835 563 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 KCTD21Q4G0X4 260 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 SLC22A6Q4U2R8 563 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 AWAT2Q6E213 333 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 GLIPR1L1Q6UWM5 242 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 GDPD3Q7L5L3 318 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 KIR3DL3Q8N743 410 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 C1orf147Q96MC9 270 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 ZNF48Q96MX3 618 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 GFI1Q99684 422 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 METTL9Q9H1A3 318 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 SEBOXQ9HB31 216 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 RHOFQ9HBH0 211 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 NDUFB11Q9NX14 153 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 ING3Q9NXR8 418 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 GLS2Q9UI32 602 aa11.32□□□□□ -0.6
SHKBP1-207ENST00000595631 A0A0G2JK05 382 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 DEGS1O15121 323 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 SRMP19623 302 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 LMO1P25800 156 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 TRAM1Q15629 374 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 NEDD8Q15843 81 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 CMTM4Q8IZR5 234 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 PNKDQ8N490 385 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 BPIFB2Q8N4F0 458 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 NKAIN3Q8N8D7 197 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 Q8NFD4 153 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 OR51T1Q8NGJ9 327 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 PHYHIPQ92561 330 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 S100A13Q99584 98 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 MS4A7Q9GZW8 240 aaPredicted RBP11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 KCNK15Q9H427 330 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 IL36GQ9NZH8 169 aa11.31□□□□□ -0.6
SHKBP1-207ENST00000595631 TRAV24A0A0B4J272 114 aa11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 A0A1W2PRD5 423 aa11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 A0A1W2PRF3 423 aa11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 A0A1W2PRM7 423 aa11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 RNASEK-C17orf49H0YIS7 233 aa11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 M0R1W7 72 aa11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 GEMIN2O14893 280 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 VENTXO95231 258 aa11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 CSTBP04080 98 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 PSMA1P25786 263 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 CALRP27797 417 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 BMXP51813 675 aa11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 DLX6P56179 175 aa11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 RBM11P57052 281 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 AESQ08117 197 aa11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 IL13RA2Q14627 380 aa11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 ATXN7L3Q14CW9 347 aaPredicted RBP11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 GPR157Q5UAW9 335 aa11.3□□□□□ -0.6
SHKBP1-207ENST00000595631 CDH26Q8IXH8 852 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms