RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 GPR37O15354 613 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 MAGEB3O15480 346 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 MRPS14O60783 128 aaKnown RBP10.21□□□□□ -0.77
UPF1-203ENST00000594504 RPL15P61313 204 aaKnown RBP10.21□□□□□ -0.77
UPF1-203ENST00000594504 PPP3R1P63098 170 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 GPR50Q13585 617 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 KISS1Q15726 138 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 TBCEQ15813 527 aaPredicted RBP10.21□□□□□ -0.77
UPF1-203ENST00000594504 DGUOKQ16854 277 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 LRRC10Q5BKY1 277 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 MS4A15Q8N5U1 240 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 FAM110DQ8TAY7 271 aaPredicted RBP10.21□□□□□ -0.77
UPF1-203ENST00000594504 C17orf50Q8WW18 174 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 TNFRSF14Q92956 283 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 SDSLQ96GA7 329 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 GAFA1Q96PS6 74 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 SPACA5Q96QH8 159 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 YTHDF1Q9BYJ9 559 aaKnown RBP10.21□□□□□ -0.77
UPF1-203ENST00000594504 ELL3Q9HB65 397 aaPredicted RBP10.21□□□□□ -0.77
UPF1-203ENST00000594504 ISYNA1Q9NPH2 558 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 CKLFQ9UBR5 152 aa10.21□□□□□ -0.77
UPF1-203ENST00000594504 TRBV5-7A0A0A0MS05 114 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 RFPL4AA6NLU0 287 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 RFPL4AL1F8VTS6 287 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 GPX5O75715 221 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 ALDOBP05062 364 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 FSTP19883 344 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 PAX6P26367 422 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 MAPK3P27361 379 aaPredicted RBP10.2□□□□□ -0.78
UPF1-203ENST00000594504 GABRA2P47869 451 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 SLC35E4Q6ICL7 350 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 CRIP3Q6Q6R5 217 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 METAP1DQ6UB28 335 aaPredicted RBP10.2□□□□□ -0.78
UPF1-203ENST00000594504 GDPGP1Q6ZNW5 385 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 SAXO1Q8IYX7 474 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 BATF2Q8N1L9 274 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 OR51A2Q8NGJ7 313 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 UFD1Q92890 307 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 EMG1Q92979 244 aaKnown RBP10.2□□□□□ -0.78
UPF1-203ENST00000594504 RFT1Q96AA3 541 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 DERL3Q96Q80 235 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 OR14A2Q96R54 314 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 C16orf95Q9H693 158 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 RHOFQ9HBH0 211 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 TMEM138Q9NPI0 162 aa10.2□□□□□ -0.78
UPF1-203ENST00000594504 F8VVB4 439 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 F8VWA3 439 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 KDM4BO94953 1096 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 INMTO95050 263 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 FBP1P09467 338 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 HSMCR30P0CW71 290 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 TMEM225BP0DP42 221 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 NDUFB7P17568 137 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 IGFBP3P17936 291 aaPredicted RBP10.19□□□□□ -0.78
UPF1-203ENST00000594504 BDKRB2P30411 391 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 PRDX2P32119 198 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 MAP2K4P45985 399 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 CAV3P56539 151 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 ZP1P60852 638 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 MLLT11Q13015 90 aaPredicted RBP10.19□□□□□ -0.78
UPF1-203ENST00000594504 TPBGQ13641 420 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 DHRS7BQ6IAN0 325 aaPredicted RBP10.19□□□□□ -0.78
UPF1-203ENST00000594504 RNF144BQ7Z419 303 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 CMTM4Q8IZR5 234 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 FAM58AQ8N1B3 248 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 ZNF561Q8N587 486 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 CD177Q8N6Q3 437 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 OR52N4Q8NGI2 321 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 OR5D18Q8NGL1 313 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 C8orf46Q8TAG6 207 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 PPA2Q9H2U2 334 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 SEBOXQ9HB31 216 aaPredicted RBP10.19□□□□□ -0.78
UPF1-203ENST00000594504 RBFOX1Q9NWB1 397 aaKnown RBP10.19□□□□□ -0.78
UPF1-203ENST00000594504 SLC25A10Q9UBX3 287 aaPredicted RBP10.19□□□□□ -0.78
UPF1-203ENST00000594504 VPREB3Q9UKI3 123 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 FOXJ3Q9UPW0 622 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 SIGLEC9Q9Y336 463 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 MAB21L2Q9Y586 359 aa10.19□□□□□ -0.78
UPF1-203ENST00000594504 IGKV1-12A0A0C4DH73 117 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 MEIOCA2RUB1 952 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 ANGPTL7O43827 346 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 TSPAN9O75954 239 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 IGKV1D-12P01611 117 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 BCL3P20749 454 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 SAA4P35542 130 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 TGFBR2P37173 567 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 NPBWR2P48146 333 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 GUCA2AQ02747 115 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 DDI2Q5TDH0 399 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 LIPKQ5VXJ0 399 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 HCP5Q6MZN7 132 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 ZNF367Q7RTV3 350 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 SATL1Q86VE3 508 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 SVOPQ8N4V2 548 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 ZNRF1Q8ND25 227 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 TMEM185AQ8NFB2 350 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 PXT1Q8NFP0 134 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 ORAI1Q96D31 301 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 DMRTB1Q96MA1 342 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 GPER1Q99527 375 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms