RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 GRK1Q15835 563 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 TMEM200BQ69YZ2 307 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 ELP2Q6IA86 826 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 ASCL4Q6XD76 172 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 C1orf122Q6ZSJ8 110 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 GDPD3Q7L5L3 318 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 MS4A15Q8N5U1 240 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 OR5D13Q8NGL4 314 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 TBC1D15Q8TC07 691 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 JMJD8Q96S16 334 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 CHST6Q9GZX3 395 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 METTL8Q9H825 291 aaKnown RBP11.95□□□□□ -0.5
VRK3-206ENST00000594090 ISYNA1Q9NPH2 558 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 ESM1Q9NQ30 184 aa11.95□□□□□ -0.5
VRK3-206ENST00000594090 A0A1W2PPH5 198 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 SIRPB1O00241 398 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 HSMCR30P0CW71 290 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 OR3A1P47881 315 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 EDDM3BP56851 147 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 GABARAPL2P60520 117 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 PRB3Q04118 309 aaPredicted RBP11.94□□□□□ -0.5
VRK3-206ENST00000594090 KLRD1Q13241 179 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 TPBGQ13641 420 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 EDDM3AQ14507 147 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 ZNF273Q14593 569 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 RSU1Q15404 277 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 ACSM3Q53FZ2 586 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 LIPKQ5VXJ0 399 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 UNQ9370/PRO34162Q6UXP9 181 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 RBMS3Q6XE24 437 aaKnown RBP11.94□□□□□ -0.5
VRK3-206ENST00000594090 PDZD9Q8IXQ8 264 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 Q8NFD4 153 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 OR4S1Q8NGB4 309 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 OR10K1Q8NGX5 313 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 TNFRSF14Q92956 283 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 UNKLQ9H9P5 680 aaKnown RBP11.94□□□□□ -0.5
VRK3-206ENST00000594090 MDFIC2A0A1B0GVS7 189 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 RNASEK-C17orf49H0YIS7 233 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 SC5DO75845 299 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 CDRT1O95170 752 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 MAS1P04201 325 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 ZNF44P15621 663 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 CCL3L1P16619 93 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 CPEP16870 476 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 PRTN3P24158 256 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 LMO1P25800 156 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 GUCA2AQ02747 115 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 FAM27D1Q5T7N8 215 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 NCR3LG1Q68D85 454 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 Q6P435 159 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 TCF23Q7RTU1 214 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 ZNF367Q7RTV3 350 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 PHC2Q8IXK0 858 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 NKAIN3Q8N8D7 197 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 ZDHHC22Q8N966 263 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 PPP1R35Q8TAP8 253 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 MGLLQ99685 303 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 C19orf24Q9BVV8 132 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 METTL9Q9H1A3 318 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 IL36GQ9NZH8 169 aa11.94□□□□□ -0.5
VRK3-206ENST00000594090 SLC33A1O00400 549 aaPredicted RBP11.93□□□□□ -0.5
VRK3-206ENST00000594090 MGST3O14880 152 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 HTR3BO95264 441 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 GP2P55259 537 aaKnown RBP11.93□□□□□ -0.5
VRK3-206ENST00000594090 MEF2CQ06413 473 aaPredicted RBP11.93□□□□□ -0.5
VRK3-206ENST00000594090 SCN1BQ07699 218 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 IL13RA2Q14627 380 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 DEFB112Q30KQ8 113 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 PIGYQ3MUY2 71 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 CDH26Q8IXH8 852 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 JAGN1Q8N5M9 183 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 C11orf42Q8N5U0 333 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 TPRX1Q8N7U7 411 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 CHST4Q8NCG5 386 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 OR51T1Q8NGJ9 327 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 ZFAND2BQ8WV99 257 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 TMEM203Q969S6 136 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 NR1H4Q96RI1 486 aaPredicted RBP11.93□□□□□ -0.5
VRK3-206ENST00000594090 PPA2Q9H2U2 334 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 ACOT13Q9NPJ3 140 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 ING4Q9UNL4 249 aa11.93□□□□□ -0.5
VRK3-206ENST00000594090 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 MEX3AA1L020 520 aaKnown RBP11.92□□□□□ -0.5
VRK3-206ENST00000594090 DNAJC9-AS1A6NH13 148 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 TRIM77I1YAP6 450 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 DEGS1O15121 323 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 MRPS14O60783 128 aaKnown RBP11.92□□□□□ -0.5
VRK3-206ENST00000594090 CSN2P05814 226 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 SERPINA2P20848 420 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 DLX6P56179 175 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 RPS25P62851 125 aaKnown RBP11.92□□□□□ -0.5
VRK3-206ENST00000594090 UBA52P62987 128 aaKnown RBP11.92□□□□□ -0.5
VRK3-206ENST00000594090 BAMBIQ13145 260 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 LYPD6Q86Y78 171 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 PIP4P2Q8N4L2 257 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 MUL1Q969V5 352 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 C1orf147Q96MC9 270 aaPredicted RBP11.92□□□□□ -0.5
VRK3-206ENST00000594090 S100A13Q99584 98 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 TCF7L1Q9HCS4 588 aa11.92□□□□□ -0.5
VRK3-206ENST00000594090 MRPS28Q9Y2Q9 187 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms