RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 C18orf65Q6ZTR6 163 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 AMIGO2Q86SJ2 522 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 FAM58AQ8N1B3 248 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 ABHD12Q8N2K0 398 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 DTX3Q8N9I9 347 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 DNAAF1Q8NEP3 725 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 OR10H4Q8NGA5 316 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 OR51A4Q8NGJ6 313 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 BCAS4Q8TDM0 211 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 EME1Q96AY2 570 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 SPACA5Q96QH8 159 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 SLC25A33Q9BSK2 321 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 LIN7BQ9HAP6 207 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 HMG20AQ9NP66 347 aa8.48□□□□□ -1.05
USE1-203ENST00000593597 WARS2Q9UGM6 360 aaKnown RBP8.48□□□□□ -1.05
USE1-203ENST00000593597 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.48□□□□□ -1.05
USE1-203ENST00000593597 DNAH7Q8WXX0 4024 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 STAB2Q8WWQ8 2551 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 J3QRE1 110 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 GYG2O15488 501 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 GATBO75879 557 aaKnown RBP8.47□□□□□ -1.05
USE1-203ENST00000593597 SULT1C4O75897 302 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 DNAJC8O75937 253 aaPredicted RBP8.47□□□□□ -1.05
USE1-203ENST00000593597 ATF1P18846 271 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 HOXD3P31249 432 aaPredicted RBP8.47□□□□□ -1.05
USE1-203ENST00000593597 ACTR3P61158 418 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 AESQ08117 197 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 PDZK1IP1Q13113 114 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 C17orf58Q2M2W7 97 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 HLA-DRB5Q30154 266 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 DNAL1Q4LDG9 190 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 ARSJQ5FYB0 599 aaPredicted RBP8.47□□□□□ -1.05
USE1-203ENST00000593597 HEPN1Q6WQI6 88 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 LINC00482Q8N8I6 264 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 OR5D18Q8NGL1 313 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 OR2G2Q8NGZ5 317 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 CORO2AQ92828 525 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 FGGYQ96C11 551 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 RBM14Q96PK6 669 aaKnown RBP8.47□□□□□ -1.05
USE1-203ENST00000593597 MBOAT4Q96T53 435 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 GABARAPL3Q9BY60 117 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 PRRG3Q9BZD7 231 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 COMMD4Q9H0A8 199 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 PPIL3Q9H2H8 161 aaKnown RBP8.47□□□□□ -1.05
USE1-203ENST00000593597 FRRS1LQ9P0K9 344 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 H2AFY2Q9P0M6 372 aaPredicted RBP8.47□□□□□ -1.05
USE1-203ENST00000593597 DPM3Q9P2X0 92 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 GSTK1Q9Y2Q3 226 aa8.47□□□□□ -1.05
USE1-203ENST00000593597 UBE2J1Q9Y385 318 aaPredicted RBP8.47□□□□□ -1.05
USE1-203ENST00000593597 TSSC4Q9Y5U2 329 aaPredicted RBP8.47□□□□□ -1.05
USE1-203ENST00000593597 A0A087X0M5 115 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 A0A1B0GX30 115 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 TCRBV4S1A1TA0A5B7 111 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 E9PQ18 207 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 G3V2T6 193 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 PEX14O75381 377 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 KDM4BO94953 1096 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 OR2F2O95006 317 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 CGB3P0DN86 165 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 CGB7P0DN87 165 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 PF4V1P10720 104 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 LMO1P25800 156 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 RBP2P50120 134 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 ATP1B3P54709 279 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 DIAPH2-AS1Q14236 149 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 CDK5R1Q15078 307 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 SPIN3Q5JUX0 258 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 TPTE2P1Q5T6R2 138 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 UTS2BQ765I0 119 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 C16orf82Q7Z2V1 217 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 TRAPPC6BQ86SZ2 158 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 Q8IYB0 196 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 PP6455Q8WZ26 134 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 C10orf35Q96D05 121 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 ZNF581Q9P0T4 197 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 GNG8Q9UK08 70 aa8.46□□□□□ -1.06
USE1-203ENST00000593597 ODAMA1E959 279 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 FAM90A18PA6NE21 464 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 FAM90A16PA6NEW6 464 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 FAM90A20PA6NIJ5 464 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 FAM90A9PA6NNJ1 464 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 FAM90A12PA8MX19 464 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 FAM90A5PA8MXJ8 464 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 BUB1B-PAK6H3BSN5 160 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 SLC33A1O00400 549 aaPredicted RBP8.45□□□□□ -1.06
USE1-203ENST00000593597 ALDOBP05062 364 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 FAM90A15PP0C7V4 464 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 FAM90A13PP0C7W8 464 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 FAM90A14PP0C7W9 464 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 FAM90A24PP0C7X0 464 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 UBCP0CG48 685 aaKnown RBP8.45□□□□□ -1.06
USE1-203ENST00000593597 MTCP1P56278 107 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 ZP1P60852 638 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 SLC35A2P78381 396 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 ATXN7L3Q14CW9 347 aaPredicted RBP8.45□□□□□ -1.06
USE1-203ENST00000593597 VAX1Q5SQQ9 334 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 FDX2Q6P4F2 183 aa8.45□□□□□ -1.06
USE1-203ENST00000593597 CENPVQ7Z7K6 275 aaPredicted RBP8.45□□□□□ -1.06
USE1-203ENST00000593597 ENTHD1Q8IYW4 607 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms