RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 RTN4RL2Q86UN3 420 aa19.14■□□□□ 0.65
LSM4-202ENST00000593564 ABHD12Q8N2K0 398 aa19.14■□□□□ 0.65
LSM4-202ENST00000593564 RFKQ969G6 155 aa19.14■□□□□ 0.65
LSM4-202ENST00000593564 EME1Q96AY2 570 aa19.14■□□□□ 0.65
LSM4-202ENST00000593564 GABARAPL3Q9BY60 117 aa19.14■□□□□ 0.65
LSM4-202ENST00000593564 GAL3ST2Q9H3Q3 398 aa19.14■□□□□ 0.65
LSM4-202ENST00000593564 A0A1W2PRX2 142 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 CALCBP10092 127 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 ATF1P18846 271 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 CD33P20138 364 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 SNU13P55769 128 aaKnown RBP19.13■□□□□ 0.65
LSM4-202ENST00000593564 PDZK1IP1Q13113 114 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 PRAMEF5Q5TYX0 476 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 HEPN1Q6WQI6 88 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 AMIGO2Q86SJ2 522 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 OR2G2Q8NGZ5 317 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 ZNF596Q8TC21 504 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 BCAS4Q8TDM0 211 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 SPSB1Q96BD6 273 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 HMG20AQ9NP66 347 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.13■□□□□ 0.65
LSM4-202ENST00000593564 AP4S1Q9Y587 144 aa19.13■□□□□ 0.65
LSM4-202ENST00000593564 TRGV10A0A0A0MS01 117 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 SIRPB1O00241 398 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 SH2D1BO14796 132 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 IGLV1-47P01700 117 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 FCGR1AP12314 374 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 CDK2P24941 298 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 BRS3P32247 399 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 TCTEX1D4Q5JR98 221 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 BAIAP2L2Q6UXY1 529 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 CENPVQ7Z7K6 275 aaPredicted RBP19.12■□□□□ 0.65
LSM4-202ENST00000593564 CAPSLQ8WWF8 208 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 CORO2AQ92828 525 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 FGGYQ96C11 551 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 OPALINQ96PE5 141 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 MBOAT4Q96T53 435 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 RIBC2Q9H4K1 309 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 EXOSC4Q9NPD3 245 aaKnown RBP19.12■□□□□ 0.65
LSM4-202ENST00000593564 TAS2R3Q9NYW6 316 aa19.12■□□□□ 0.65
LSM4-202ENST00000593564 FUOMA2VDF0 154 aa19.11■□□□□ 0.65
LSM4-202ENST00000593564 OR2H2O95918 312 aa19.11■□□□□ 0.65
LSM4-202ENST00000593564 ISG15P05161 165 aa19.11■□□□□ 0.65
LSM4-202ENST00000593564 PF4V1P10720 104 aa19.11■□□□□ 0.65
LSM4-202ENST00000593564 IGLL1P15814 213 aa19.11■□□□□ 0.65
LSM4-202ENST00000593564 ZNF20P17024 532 aa19.11■□□□□ 0.65
LSM4-202ENST00000593564 CD24P25063 80 aa19.11■□□□□ 0.65
LSM4-202ENST00000593564 CD34P28906 385 aa19.11■□□□□ 0.65
LSM4-202ENST00000593564 ARHGDIBP52566 201 aa19.11■□□□□ 0.65
LSM4-202ENST00000593564 STMN2Q93045 179 aa19.11■□□□□ 0.65
LSM4-202ENST00000593564 GSTK1Q9Y2Q3 226 aa19.11■□□□□ 0.65
LSM4-202ENST00000593564 IGKV1-12A0A0C4DH73 117 aa19.1■□□□□ 0.65
LSM4-202ENST00000593564 LEUTXA8MZ59 168 aa19.1■□□□□ 0.65
LSM4-202ENST00000593564 KDM4BO94953 1096 aa19.1■□□□□ 0.65
LSM4-202ENST00000593564 IGKV1D-12P01611 117 aa19.1■□□□□ 0.65
LSM4-202ENST00000593564 LMO1P25800 156 aa19.1■□□□□ 0.65
LSM4-202ENST00000593564 FDX2Q6P4F2 183 aa19.1■□□□□ 0.65
LSM4-202ENST00000593564 KCTD20Q7Z5Y7 419 aa19.1■□□□□ 0.65
LSM4-202ENST00000593564 SLC25A33Q9BSK2 321 aa19.1■□□□□ 0.65
LSM4-202ENST00000593564 COMMD4Q9H0A8 199 aa19.1■□□□□ 0.65
LSM4-202ENST00000593564 FRRS1LQ9P0K9 344 aa19.1■□□□□ 0.65
LSM4-202ENST00000593564 TSSC4Q9Y5U2 329 aaPredicted RBP19.1■□□□□ 0.65
LSM4-202ENST00000593564 OR2F2O95006 317 aa19.09■□□□□ 0.65
LSM4-202ENST00000593564 GLIPR1P48060 266 aa19.09■□□□□ 0.65
LSM4-202ENST00000593564 ABCA11PQ4W5N1 156 aa19.09■□□□□ 0.65
LSM4-202ENST00000593564 CCDC121Q6ZUS5 278 aa19.09■□□□□ 0.65
LSM4-202ENST00000593564 RFT1Q96AA3 541 aa19.09■□□□□ 0.65
LSM4-202ENST00000593564 CREB3L1Q96BA8 519 aa19.09■□□□□ 0.65
LSM4-202ENST00000593564 RBM14Q96PK6 669 aaKnown RBP19.09■□□□□ 0.65
LSM4-202ENST00000593564 RHOFQ9HBH0 211 aa19.09■□□□□ 0.65
LSM4-202ENST00000593564 PCDHGB5Q9Y5G0 923 aa19.09■□□□□ 0.65
LSM4-202ENST00000593564 TCRBV4S1A1TA0A5B7 111 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 MT-ND2P03891 347 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 CSN2P05814 226 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 LPLP06858 475 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 OCM2P0CE71 109 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 OCMP0CE72 109 aaPredicted RBP19.08■□□□□ 0.64
LSM4-202ENST00000593564 GDNFP39905 211 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 CEACAM3P40198 252 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 NANOS3P60323 173 aaKnown RBP19.08■□□□□ 0.64
LSM4-202ENST00000593564 AESQ08117 197 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 BNIP1Q12981 228 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 OR4X2Q8NGF9 303 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 MYDGFQ969H8 173 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 ZNF286AQ9HBT8 521 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 HHLA2Q9UM44 414 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 OAZ3Q9UMX2 235 aa19.08■□□□□ 0.64
LSM4-202ENST00000593564 KIAA2026Q5HYC2 2103 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 A0A087X0M5 115 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 A0A1B0GX30 115 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 ODAMA1E959 279 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 FAM172BPA6NC97 362 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 J3QRE1 110 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 PF4P02776 101 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 AMY1AP04745 511 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 AMY2AP04746 511 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 PTGFRP43088 359 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 CCR9P51686 369 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 SLC35A2P78381 396 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 KPNB1Q14974 876 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms