RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 CACNA1HO95180 2353 aa13.49□□□□□ -0.25
MBD1-227ENST00000592060 DOCK7Q96N67 2140 aa13.49□□□□□ -0.25
MBD1-227ENST00000592060 ANKRD30BLA7E2S9 258 aa13.49□□□□□ -0.25
MBD1-227ENST00000592060 A8MXK9 166 aa13.49□□□□□ -0.25
MBD1-227ENST00000592060 TPD52L2O43399 206 aaKnown RBP13.49□□□□□ -0.25
MBD1-227ENST00000592060 NAPSAO96009 420 aa13.49□□□□□ -0.25
MBD1-227ENST00000592060 ZNF14P17017 642 aaPredicted RBP13.49□□□□□ -0.25
MBD1-227ENST00000592060 NUBP1P53384 320 aa13.49□□□□□ -0.25
MBD1-227ENST00000592060 FXYD4P59646 89 aa13.49□□□□□ -0.25
MBD1-227ENST00000592060 TMEM187Q14656 261 aa13.49□□□□□ -0.25
MBD1-227ENST00000592060 SRSF7Q16629 238 aaKnown RBP eCLIP13.49□□□□□ -0.25
MBD1-227ENST00000592060 AQP10Q96PS8 301 aa13.49□□□□□ -0.25
MBD1-227ENST00000592060 CYTL1Q9NRR1 136 aa13.49□□□□□ -0.25
MBD1-227ENST00000592060 OR5B21A6NL26 309 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 TRAPPC2LH3BP13 241 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 WISP2O76076 250 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 IGHV1-2P23083 117 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 GLP1RP43220 463 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 FAM219AQ8IW50 185 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 EIF4E3Q8N5X7 224 aaKnown RBP13.48□□□□□ -0.25
MBD1-227ENST00000592060 OR5L1Q8NGL2 311 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 MRPL24Q96A35 216 aaKnown RBP13.48□□□□□ -0.25
MBD1-227ENST00000592060 LINC00052Q96N35 136 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 HIST1H2AAQ96QV6 131 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 OR51B6Q9H340 312 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 NARFLQ9H6Q4 476 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 DNAJB11Q9UBS4 358 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 TUBD1Q9UJT1 453 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 MEMO1Q9Y316 297 aa13.48□□□□□ -0.25
MBD1-227ENST00000592060 J3QW42 95 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 PET100P0DJ07 73 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 AADACP22760 399 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 SNTB1Q13884 538 aaKnown RBP13.47□□□□□ -0.25
MBD1-227ENST00000592060 TBC1D28Q2M2D7 210 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 IAH1Q2TAA2 248 aaPredicted RBP13.47□□□□□ -0.25
MBD1-227ENST00000592060 GGNBP1Q5YKI7 109 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 HAGHLQ6PII5 290 aaPredicted RBP13.47□□□□□ -0.25
MBD1-227ENST00000592060 UNQ6126/PRO20091Q6UXV3 157 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 SLC38A6Q8IZM9 456 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 BVESQ8NE79 360 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 RTN4IP1Q8WWV3 396 aaPredicted RBP13.47□□□□□ -0.25
MBD1-227ENST00000592060 RSRP1Q9BUV0 290 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 Q9N2K0 584 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 SLC2A9Q9NRM0 540 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 TEX46H3BTG2 121 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 CELA3BP08861 270 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 OR5AC1P0C628 307 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 GNG3P63215 75 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 NAAAQ02083 359 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 ABCA11PQ4W5N1 156 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 IGSF11Q5DX21 431 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 OR2T2Q6IF00 324 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 LINC00596Q86U02 117 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 LRTM2Q8N967 370 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 PKIBQ9C010 78 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 SHARPINQ9H0F6 387 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 PLSCR2Q9NRY7 297 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 GSKIPQ9P0R6 139 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 NUP50Q9UKX7 468 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 LHX6Q9UPM6 363 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 SESN1Q9Y6P5 492 aa13.47□□□□□ -0.25
MBD1-227ENST00000592060 ESPL1Q14674 2120 aa13.46□□□□□ -0.25
MBD1-227ENST00000592060 TRAV17A0A0B4J275 112 aa13.46□□□□□ -0.25
MBD1-227ENST00000592060 AQP7O14520 342 aa13.46□□□□□ -0.25
MBD1-227ENST00000592060 IL24Q13007 206 aa13.46□□□□□ -0.25
MBD1-227ENST00000592060 PHLDA2Q53GA4 152 aa13.46□□□□□ -0.25
MBD1-227ENST00000592060 PAN3Q58A45 887 aaKnown RBP13.46□□□□□ -0.25
MBD1-227ENST00000592060 FBXW12Q6X9E4 464 aa13.46□□□□□ -0.25
MBD1-227ENST00000592060 ZNF573Q86YE8 665 aa13.46□□□□□ -0.25
MBD1-227ENST00000592060 GCNT2Q8N0V5 402 aa13.46□□□□□ -0.25
MBD1-227ENST00000592060 CNTNAP3BQ96NU0 1288 aa13.46□□□□□ -0.25
MBD1-227ENST00000592060 TRIB1Q96RU8 372 aa13.46□□□□□ -0.25
MBD1-227ENST00000592060 SUCNR1Q9BXA5 334 aa13.46□□□□□ -0.25
MBD1-227ENST00000592060 CNTNAP3Q9BZ76 1288 aa13.46□□□□□ -0.25
MBD1-227ENST00000592060 A0A1B0GW55 424 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 SMPD2O60906 423 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 PPYP01298 95 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 DUX4L2P0CJ85 424 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 DUX4L3P0CJ86 424 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 DUX4L4P0CJ87 422 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 DUX4L5P0CJ88 424 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 DUX4L6P0CJ89 424 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 DUX4L7P0CJ90 424 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 PRKACAP17612 351 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 S100A10P60903 97 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 HERV-K104P61576 105 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 IL13RA2Q14627 380 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 SPATA46Q5T0L3 261 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 FAM214BQ7L5A3 538 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 OR11L1Q8NGX0 322 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 ZNF488Q96MN9 340 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 SLC5A7Q9GZV3 580 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 OR51I2Q9H344 312 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 PLK3Q9H4B4 646 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 FAM86C1Q9NVL1 165 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 DUX4Q9UBX2 424 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 KCNIP3Q9Y2W7 256 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 SHANK1Q9Y566 2161 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 SCO1O75880 301 aa13.45□□□□□ -0.26
MBD1-227ENST00000592060 IFNA21P01568 189 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms