RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 ADAT3Q96EY9 351 aaPredicted RBP12.6□□□□□ -0.39
CIRBP-230ENST00000591055 GABARAPL1Q9H0R8 117 aa12.6□□□□□ -0.39
CIRBP-230ENST00000591055 GAL3ST2Q9H3Q3 398 aa12.6□□□□□ -0.39
CIRBP-230ENST00000591055 LIN7BQ9HAP6 207 aa12.6□□□□□ -0.39
CIRBP-230ENST00000591055 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.6□□□□□ -0.39
CIRBP-230ENST00000591055 TRGV10A0A0A0MS01 117 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 IGKV1-9A0A0C4DH69 117 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 TCRBV4S1A1TA0A5B7 111 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 FUOMA2VDF0 154 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 SH2D1BO14796 132 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 MPIG6BO95866 241 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 ATF1P18846 271 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 CD24P25063 80 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 FASP25445 335 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 ARHGDIBP52566 201 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 CDC42P60953 191 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 BDH1Q02338 343 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 TP53I3Q53FA7 332 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 TMEM244Q5VVB8 128 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 BAIAP2L2Q6UXY1 529 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 CCDC121Q6ZUS5 278 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 LHFPL2Q6ZUX7 228 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 ZNF596Q8TC21 504 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 CIB1Q99828 191 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 SLC25A33Q9BSK2 321 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 EXOSC4Q9NPD3 245 aaKnown RBP12.59□□□□□ -0.39
CIRBP-230ENST00000591055 TSSC4Q9Y5U2 329 aaPredicted RBP12.59□□□□□ -0.39
CIRBP-230ENST00000591055 COL7A1Q02388 2944 aa12.59□□□□□ -0.39
CIRBP-230ENST00000591055 LEUTXA8MZ59 168 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 PF4P02776 101 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 ZNF20P17024 532 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 CDK2P24941 298 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 POLR2IP36954 125 aaKnown RBP12.58□□□□□ -0.4
CIRBP-230ENST00000591055 ISL1P61371 349 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 ZNF85Q03923 595 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 PDZK1IP1Q13113 114 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 TMED1Q13445 227 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 ABCA11PQ4W5N1 156 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 TCTEX1D4Q5JR98 221 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 HEPN1Q6WQI6 88 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 UTS2BQ765I0 119 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 AMIGO2Q86SJ2 522 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 OR8J1Q8NGP2 316 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 RFKQ969G6 155 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 EME1Q96AY2 570 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 FGGYQ96C11 551 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 HMG20AQ9NP66 347 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 TAS2R3Q9NYW6 316 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 GSTK1Q9Y2Q3 226 aa12.58□□□□□ -0.4
CIRBP-230ENST00000591055 FAM172BPA6NC97 362 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 OR2F2O95006 317 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 OR2H2O95918 312 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 LPLP06858 475 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 OCM2P0CE71 109 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 OCMP0CE72 109 aaPredicted RBP12.57□□□□□ -0.4
CIRBP-230ENST00000591055 SLC35A2P78381 396 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 KPNB1Q14974 876 aaKnown RBP12.57□□□□□ -0.4
CIRBP-230ENST00000591055 OR4X2Q8NGF9 303 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 OR2G2Q8NGZ5 317 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 CORO2AQ92828 525 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 MYDGFQ969H8 173 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 RNF166Q96A37 237 aaPredicted RBP12.57□□□□□ -0.4
CIRBP-230ENST00000591055 RFT1Q96AA3 541 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 SPSB1Q96BD6 273 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 OPALINQ96PE5 141 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 RBM14Q96PK6 669 aaKnown RBP12.57□□□□□ -0.4
CIRBP-230ENST00000591055 RIBC2Q9H4K1 309 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 AP4S1Q9Y587 144 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 PCDHGB5Q9Y5G0 923 aa12.57□□□□□ -0.4
CIRBP-230ENST00000591055 TOR1AO14656 332 aa12.56□□□□□ -0.4
CIRBP-230ENST00000591055 IGLV1-47P01700 117 aa12.56□□□□□ -0.4
CIRBP-230ENST00000591055 CEACAM3P40198 252 aa12.56□□□□□ -0.4
CIRBP-230ENST00000591055 GLIPR1P48060 266 aa12.56□□□□□ -0.4
CIRBP-230ENST00000591055 SCN1BQ07699 218 aa12.56□□□□□ -0.4
CIRBP-230ENST00000591055 AESQ08117 197 aa12.56□□□□□ -0.4
CIRBP-230ENST00000591055 KHDC1LQ5JSQ8 128 aa12.56□□□□□ -0.4
CIRBP-230ENST00000591055 CREB3L1Q96BA8 519 aa12.56□□□□□ -0.4
CIRBP-230ENST00000591055 MBOAT4Q96T53 435 aa12.56□□□□□ -0.4
CIRBP-230ENST00000591055 GABARAPL3Q9BY60 117 aa12.56□□□□□ -0.4
CIRBP-230ENST00000591055 ZNF286AQ9HBT8 521 aa12.56□□□□□ -0.4
CIRBP-230ENST00000591055 IGKV1-12A0A0C4DH73 117 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 ODAMA1E959 279 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 SH2D7A6NKC9 451 aaPredicted RBP12.55□□□□□ -0.4
CIRBP-230ENST00000591055 K7EIL1 84 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 KDM4BO94953 1096 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 CLIC3O95833 236 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 IGKV1D-12P01611 117 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 ISG15P05161 165 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 FCGR1AP12314 374 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 ZNF44P15621 663 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 LMO1P25800 156 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 CD34P28906 385 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 GDNFP39905 211 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 PTGFRP43088 359 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 PRRX1P54821 245 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 HLA-DRB5Q30154 266 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 C9orf152Q5JTZ5 239 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 TPTE2P1Q5T6R2 138 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 KCTD20Q7Z5Y7 419 aa12.55□□□□□ -0.4
CIRBP-230ENST00000591055 OR4D6Q8NGJ1 314 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms